Gene : Cagra.1838s0024 C. grandiflora v1.1
Defline:  (1 of 1) KOG1869 - Splicing coactivator SRm160/300, subunit SRm300 Genomic Order:  24
Name:  ? Cagra.1838s0024 Secondary Identifier:  ? PAC:28918400
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1838s0024 0.5kb upstream 0.5kb upstream 2745 true Scaffold1838: 83242-85986 Capsella grandiflora
Cagra.1838s0024 0.5kb upstream 0.5kb upstream 500 false Scaffold1838: 83242-83741 Capsella grandiflora
Cagra.1838s0024 0.5kb downstream 0.5kb downstream 2745 true Scaffold1838: 83742-86486 Capsella grandiflora
Cagra.1838s0024 0.5kb downstream 0.5kb downstream 500 false Scaffold1838: 85987-86486 Capsella grandiflora
Cagra.1838s0024 1.0kb upstream 1.0kb upstream 3245 true Scaffold1838: 82742-85986 Capsella grandiflora
Cagra.1838s0024 1.0kb upstream 1.0kb upstream 1000 false Scaffold1838: 82742-83741 Capsella grandiflora
Cagra.1838s0024 1.0kb downstream 1.0kb downstream 3245 true Scaffold1838: 83742-86986 Capsella grandiflora
Cagra.1838s0024 1.0kb downstream 1.0kb downstream 1000 false Scaffold1838: 85987-86986 Capsella grandiflora
Cagra.1838s0024 2.0kb upstream 2.0kb upstream 4245 true Scaffold1838: 81742-85986 Capsella grandiflora
Cagra.1838s0024 2.0kb upstream 2.0kb upstream 2000 false Scaffold1838: 81742-83741 Capsella grandiflora
Cagra.1838s0024 2.0kb downstream 2.0kb downstream 4245 true Scaffold1838: 83742-87986 Capsella grandiflora
Cagra.1838s0024 2.0kb downstream 2.0kb downstream 2000 false Scaffold1838: 85987-87986 Capsella grandiflora
Cagra.1838s0024 5.0kb upstream 5.0kb upstream 7245 true Scaffold1838: 78742-85986 Capsella grandiflora
Cagra.1838s0024 5.0kb upstream 5.0kb upstream 5000 false Scaffold1838: 78742-83741 Capsella grandiflora
Cagra.1838s0024 5.0kb downstream 5.0kb downstream 7245 true Scaffold1838: 83742-90986 Capsella grandiflora
Cagra.1838s0024 5.0kb downstream 5.0kb downstream 5000 false Scaffold1838: 85987-90986 Capsella grandiflora
Cagra.1838s0024 10.0kb upstream 10.0kb upstream 12245 true Scaffold1838: 73742-85986 Capsella grandiflora
Cagra.1838s0024 10.0kb upstream 10.0kb upstream 10000 false Scaffold1838: 73742-83741 Capsella grandiflora
Cagra.1838s0024 10.0kb downstream 10.0kb downstream 12245 true Scaffold1838: 83742-95986 Capsella grandiflora
Cagra.1838s0024 10.0kb downstream 10.0kb downstream 10000 false Scaffold1838: 85987-95986 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361644 5261 Brassicaceae View MSA
123836157 5264 Brassicales-Malvales View MSA
124337693 5266 SBM View MSA
124244052 5268 Malvidae View MSA
124069039 5270 Rosid View MSA
123741456 5271 Pentapetalae View MSA
122788906 5272 Eudicot View MSA
122043009 5273 Angiosperm View MSA
121350185 5274 Embryophyte View MSA
123426025 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain