Gene : Cagra.1772s0036 C. grandiflora v1.1
Defline:  (1 of 2) PTHR22814:SF33 - HEAVY METAL TRANSPORT/DETOXIFICATION DOMAIN-CONTAINING PROTEIN Genomic Order:  36
Name:  ? Cagra.1772s0036 Secondary Identifier:  ? PAC:28906945
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1772s0036 0.5kb upstream 0.5kb upstream 3066 true Scaffold1772: 113853-116918 Capsella grandiflora
Cagra.1772s0036 0.5kb upstream 0.5kb upstream 500 false Scaffold1772: 116419-116918 Capsella grandiflora
Cagra.1772s0036 0.5kb downstream 0.5kb downstream 3066 true Scaffold1772: 113353-116418 Capsella grandiflora
Cagra.1772s0036 0.5kb downstream 0.5kb downstream 500 false Scaffold1772: 113353-113852 Capsella grandiflora
Cagra.1772s0036 1.0kb upstream 1.0kb upstream 3566 true Scaffold1772: 113853-117418 Capsella grandiflora
Cagra.1772s0036 1.0kb upstream 1.0kb upstream 1000 false Scaffold1772: 116419-117418 Capsella grandiflora
Cagra.1772s0036 1.0kb downstream 1.0kb downstream 3566 true Scaffold1772: 112853-116418 Capsella grandiflora
Cagra.1772s0036 1.0kb downstream 1.0kb downstream 1000 false Scaffold1772: 112853-113852 Capsella grandiflora
Cagra.1772s0036 2.0kb upstream 2.0kb upstream 4566 true Scaffold1772: 113853-118418 Capsella grandiflora
Cagra.1772s0036 2.0kb upstream 2.0kb upstream 2000 false Scaffold1772: 116419-118418 Capsella grandiflora
Cagra.1772s0036 2.0kb downstream 2.0kb downstream 4566 true Scaffold1772: 111853-116418 Capsella grandiflora
Cagra.1772s0036 2.0kb downstream 2.0kb downstream 2000 false Scaffold1772: 111853-113852 Capsella grandiflora
Cagra.1772s0036 5.0kb upstream 5.0kb upstream 5687 true Scaffold1772: 113853-119539 Capsella grandiflora
Cagra.1772s0036 5.0kb upstream 5.0kb upstream 3121 false Scaffold1772: 116419-119539 Capsella grandiflora
Cagra.1772s0036 5.0kb downstream 5.0kb downstream 7566 true Scaffold1772: 108853-116418 Capsella grandiflora
Cagra.1772s0036 5.0kb downstream 5.0kb downstream 5000 false Scaffold1772: 108853-113852 Capsella grandiflora
Cagra.1772s0036 10.0kb upstream 10.0kb upstream 5687 true Scaffold1772: 113853-119539 Capsella grandiflora
Cagra.1772s0036 10.0kb upstream 10.0kb upstream 3121 false Scaffold1772: 116419-119539 Capsella grandiflora
Cagra.1772s0036 10.0kb downstream 10.0kb downstream 12566 true Scaffold1772: 103853-116418 Capsella grandiflora
Cagra.1772s0036 10.0kb downstream 10.0kb downstream 10000 false Scaffold1772: 103853-113852 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122332878 5261 Brassicaceae Singleton cluster - no MSA
123841981 5264 Brassicales-Malvales View MSA
124323160 5266 SBM View MSA
124254083 5268 Malvidae View MSA
124070737 5270 Rosid View MSA
123750327 5271 Pentapetalae View MSA
122795966 5272 Eudicot View MSA
122049430 5273 Angiosperm View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain