Gene : Cagra.1777s0003 C. grandiflora v1.1
Defline:  (1 of 3) PTHR33077:SF7 - PROTEIN TIFY 6A-RELATED Genomic Order:  3
Name:  ? Cagra.1777s0003 Secondary Identifier:  ? PAC:28910333
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1777s0003 0.5kb upstream 0.5kb upstream 2609 true Scaffold1777: 9717-12325 Capsella grandiflora
Cagra.1777s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold1777: 11826-12325 Capsella grandiflora
Cagra.1777s0003 0.5kb downstream 0.5kb downstream 2609 true Scaffold1777: 9217-11825 Capsella grandiflora
Cagra.1777s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold1777: 9217-9716 Capsella grandiflora
Cagra.1777s0003 1.0kb upstream 1.0kb upstream 3109 true Scaffold1777: 9717-12825 Capsella grandiflora
Cagra.1777s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold1777: 11826-12825 Capsella grandiflora
Cagra.1777s0003 1.0kb downstream 1.0kb downstream 3109 true Scaffold1777: 8717-11825 Capsella grandiflora
Cagra.1777s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold1777: 8717-9716 Capsella grandiflora
Cagra.1777s0003 2.0kb upstream 2.0kb upstream 4109 true Scaffold1777: 9717-13825 Capsella grandiflora
Cagra.1777s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold1777: 11826-13825 Capsella grandiflora
Cagra.1777s0003 2.0kb downstream 2.0kb downstream 4109 true Scaffold1777: 7717-11825 Capsella grandiflora
Cagra.1777s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold1777: 7717-9716 Capsella grandiflora
Cagra.1777s0003 5.0kb upstream 5.0kb upstream 7109 true Scaffold1777: 9717-16825 Capsella grandiflora
Cagra.1777s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold1777: 11826-16825 Capsella grandiflora
Cagra.1777s0003 5.0kb downstream 5.0kb downstream 7109 true Scaffold1777: 4717-11825 Capsella grandiflora
Cagra.1777s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold1777: 4717-9716 Capsella grandiflora
Cagra.1777s0003 10.0kb upstream 10.0kb upstream 12109 true Scaffold1777: 9717-21825 Capsella grandiflora
Cagra.1777s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold1777: 11826-21825 Capsella grandiflora
Cagra.1777s0003 10.0kb downstream 10.0kb downstream 11825 true Scaffold1777: 1-11825 Capsella grandiflora
Cagra.1777s0003 10.0kb downstream 10.0kb downstream 9716 false Scaffold1777: 1-9716 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365568 5261 Brassicaceae View MSA
123798981 5264 Brassicales-Malvales View MSA
124296553 5266 SBM View MSA
124148671 5268 Malvidae View MSA
124069468 5270 Rosid View MSA
123746675 5271 Pentapetalae View MSA
122792842 5272 Eudicot View MSA
122042775 5273 Angiosperm View MSA
121351436 5274 Embryophyte View MSA
123382165 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain