Gene : Cagra.1777s0004 C. grandiflora v1.1
Defline:  (1 of 2) PTHR32080:SF3 - CYSTEINE-RICH REPEAT SECRETORY PROTEIN 12-RELATED Genomic Order:  4
Name:  ? Cagra.1777s0004 Secondary Identifier:  ? PAC:28910347
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1777s0004 0.5kb upstream 0.5kb upstream 1883 true Scaffold1777: 13543-15425 Capsella grandiflora
Cagra.1777s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold1777: 14926-15425 Capsella grandiflora
Cagra.1777s0004 0.5kb downstream 0.5kb downstream 1883 true Scaffold1777: 13043-14925 Capsella grandiflora
Cagra.1777s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold1777: 13043-13542 Capsella grandiflora
Cagra.1777s0004 1.0kb upstream 1.0kb upstream 2383 true Scaffold1777: 13543-15925 Capsella grandiflora
Cagra.1777s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold1777: 14926-15925 Capsella grandiflora
Cagra.1777s0004 1.0kb downstream 1.0kb downstream 2383 true Scaffold1777: 12543-14925 Capsella grandiflora
Cagra.1777s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold1777: 12543-13542 Capsella grandiflora
Cagra.1777s0004 2.0kb upstream 2.0kb upstream 3383 true Scaffold1777: 13543-16925 Capsella grandiflora
Cagra.1777s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold1777: 14926-16925 Capsella grandiflora
Cagra.1777s0004 2.0kb downstream 2.0kb downstream 3383 true Scaffold1777: 11543-14925 Capsella grandiflora
Cagra.1777s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold1777: 11543-13542 Capsella grandiflora
Cagra.1777s0004 5.0kb upstream 5.0kb upstream 6383 true Scaffold1777: 13543-19925 Capsella grandiflora
Cagra.1777s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold1777: 14926-19925 Capsella grandiflora
Cagra.1777s0004 5.0kb downstream 5.0kb downstream 6383 true Scaffold1777: 8543-14925 Capsella grandiflora
Cagra.1777s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold1777: 8543-13542 Capsella grandiflora
Cagra.1777s0004 10.0kb upstream 10.0kb upstream 11383 true Scaffold1777: 13543-24925 Capsella grandiflora
Cagra.1777s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold1777: 14926-24925 Capsella grandiflora
Cagra.1777s0004 10.0kb downstream 10.0kb downstream 11383 true Scaffold1777: 3543-14925 Capsella grandiflora
Cagra.1777s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold1777: 3543-13542 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121511009 5273 Angiosperm View MSA
122371088 5261 Brassicaceae View MSA
123800100 5264 Brassicales-Malvales View MSA
124297551 5266 SBM View MSA
124149408 5268 Malvidae View MSA
123875221 5270 Rosid View MSA
123459080 5271 Pentapetalae View MSA
122494475 5272 Eudicot View MSA
120784080 5274 Embryophyte View MSA
122826018 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain