Gene : Cagra.1777s0012 C. grandiflora v1.1
Defline:  (1 of 2) 2.3.2.2//2.6.1.2//2.6.1.4//2.6.1.44 - Gamma-glutamyltransferase / Glutamyl transpeptidase // Alanine transaminase / Glutamic--pyruvic transaminase // Glycine transaminase / Glycine aminotransferase // Alanine--glyoxylate transaminase / Alanine--glyoxylate aminotransferase Genomic Order:  12
Name:  ? Cagra.1777s0012 Secondary Identifier:  ? PAC:28910355
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora ALANINE-DEG3-PWY Capsella grandiflora pathologic  
Cgrandiflora ALANINE-SYN2-PWY Capsella grandiflora pathologic  
Cgrandiflora GLYSYN-ALA-PWY Capsella grandiflora pathologic  
Cgrandiflora PWY-7115 Capsella grandiflora pathologic  
Cgrandiflora PWY-7117 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1777s0012 0.5kb upstream 0.5kb upstream 3445 true Scaffold1777: 52255-55699 Capsella grandiflora
Cagra.1777s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold1777: 55200-55699 Capsella grandiflora
Cagra.1777s0012 0.5kb downstream 0.5kb downstream 3445 true Scaffold1777: 51755-55199 Capsella grandiflora
Cagra.1777s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold1777: 51755-52254 Capsella grandiflora
Cagra.1777s0012 1.0kb upstream 1.0kb upstream 3945 true Scaffold1777: 52255-56199 Capsella grandiflora
Cagra.1777s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold1777: 55200-56199 Capsella grandiflora
Cagra.1777s0012 1.0kb downstream 1.0kb downstream 3945 true Scaffold1777: 51255-55199 Capsella grandiflora
Cagra.1777s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold1777: 51255-52254 Capsella grandiflora
Cagra.1777s0012 2.0kb upstream 2.0kb upstream 4945 true Scaffold1777: 52255-57199 Capsella grandiflora
Cagra.1777s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold1777: 55200-57199 Capsella grandiflora
Cagra.1777s0012 2.0kb downstream 2.0kb downstream 4945 true Scaffold1777: 50255-55199 Capsella grandiflora
Cagra.1777s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold1777: 50255-52254 Capsella grandiflora
Cagra.1777s0012 5.0kb upstream 5.0kb upstream 7945 true Scaffold1777: 52255-60199 Capsella grandiflora
Cagra.1777s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold1777: 55200-60199 Capsella grandiflora
Cagra.1777s0012 5.0kb downstream 5.0kb downstream 7945 true Scaffold1777: 47255-55199 Capsella grandiflora
Cagra.1777s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold1777: 47255-52254 Capsella grandiflora
Cagra.1777s0012 10.0kb upstream 10.0kb upstream 12945 true Scaffold1777: 52255-65199 Capsella grandiflora
Cagra.1777s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold1777: 55200-65199 Capsella grandiflora
Cagra.1777s0012 10.0kb downstream 10.0kb downstream 12945 true Scaffold1777: 42255-55199 Capsella grandiflora
Cagra.1777s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold1777: 42255-52254 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367941 5261 Brassicaceae View MSA
123836743 5264 Brassicales-Malvales View MSA
124342704 5266 SBM View MSA
124251035 5268 Malvidae View MSA
124064256 5270 Rosid View MSA
123749170 5271 Pentapetalae View MSA
122793882 5272 Eudicot View MSA
122043472 5273 Angiosperm View MSA
121347513 5274 Embryophyte View MSA
123427750 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain