Gene : Cagra.1777s0019 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11850:SF99 - HOMEOBOX PROTEIN KNOTTED-1-LIKE 2-RELATED Genomic Order:  19
Name:  ? Cagra.1777s0019 Secondary Identifier:  ? PAC:28910326
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1777s0019 0.5kb upstream 0.5kb upstream 4970 true Scaffold1777: 99131-104100 Capsella grandiflora
Cagra.1777s0019 0.5kb upstream 0.5kb upstream 500 false Scaffold1777: 103601-104100 Capsella grandiflora
Cagra.1777s0019 0.5kb downstream 0.5kb downstream 4970 true Scaffold1777: 98631-103600 Capsella grandiflora
Cagra.1777s0019 0.5kb downstream 0.5kb downstream 500 false Scaffold1777: 98631-99130 Capsella grandiflora
Cagra.1777s0019 1.0kb upstream 1.0kb upstream 5470 true Scaffold1777: 99131-104600 Capsella grandiflora
Cagra.1777s0019 1.0kb upstream 1.0kb upstream 1000 false Scaffold1777: 103601-104600 Capsella grandiflora
Cagra.1777s0019 1.0kb downstream 1.0kb downstream 5470 true Scaffold1777: 98131-103600 Capsella grandiflora
Cagra.1777s0019 1.0kb downstream 1.0kb downstream 1000 false Scaffold1777: 98131-99130 Capsella grandiflora
Cagra.1777s0019 2.0kb upstream 2.0kb upstream 6470 true Scaffold1777: 99131-105600 Capsella grandiflora
Cagra.1777s0019 2.0kb upstream 2.0kb upstream 2000 false Scaffold1777: 103601-105600 Capsella grandiflora
Cagra.1777s0019 2.0kb downstream 2.0kb downstream 6470 true Scaffold1777: 97131-103600 Capsella grandiflora
Cagra.1777s0019 2.0kb downstream 2.0kb downstream 2000 false Scaffold1777: 97131-99130 Capsella grandiflora
Cagra.1777s0019 5.0kb upstream 5.0kb upstream 9470 true Scaffold1777: 99131-108600 Capsella grandiflora
Cagra.1777s0019 5.0kb upstream 5.0kb upstream 5000 false Scaffold1777: 103601-108600 Capsella grandiflora
Cagra.1777s0019 5.0kb downstream 5.0kb downstream 9470 true Scaffold1777: 94131-103600 Capsella grandiflora
Cagra.1777s0019 5.0kb downstream 5.0kb downstream 5000 false Scaffold1777: 94131-99130 Capsella grandiflora
Cagra.1777s0019 10.0kb upstream 10.0kb upstream 14470 true Scaffold1777: 99131-113600 Capsella grandiflora
Cagra.1777s0019 10.0kb upstream 10.0kb upstream 10000 false Scaffold1777: 103601-113600 Capsella grandiflora
Cagra.1777s0019 10.0kb downstream 10.0kb downstream 14470 true Scaffold1777: 89131-103600 Capsella grandiflora
Cagra.1777s0019 10.0kb downstream 10.0kb downstream 10000 false Scaffold1777: 89131-99130 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366923 5261 Brassicaceae View MSA
123799266 5264 Brassicales-Malvales View MSA
124351620 5266 SBM View MSA
124246446 5268 Malvidae View MSA
124071044 5270 Rosid View MSA
123750536 5271 Pentapetalae View MSA
122794934 5272 Eudicot View MSA
122051072 5273 Angiosperm View MSA
121351483 5274 Embryophyte View MSA
123428758 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain