Gene : Cagra.1777s0033 C. grandiflora v1.1
Defline:  (1 of 3) PTHR31458:SF3 - POLYGALACTURONASE NON-CATALYTIC SUBUNIT JP630-RELATED Genomic Order:  33
Name:  ? Cagra.1777s0033 Secondary Identifier:  ? PAC:28910341
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1777s0033 0.5kb upstream 0.5kb upstream 2802 true Scaffold1777: 161997-164798 Capsella grandiflora
Cagra.1777s0033 0.5kb upstream 0.5kb upstream 500 false Scaffold1777: 161997-162496 Capsella grandiflora
Cagra.1777s0033 0.5kb downstream 0.5kb downstream 2802 true Scaffold1777: 162497-165298 Capsella grandiflora
Cagra.1777s0033 0.5kb downstream 0.5kb downstream 500 false Scaffold1777: 164799-165298 Capsella grandiflora
Cagra.1777s0033 1.0kb upstream 1.0kb upstream 3302 true Scaffold1777: 161497-164798 Capsella grandiflora
Cagra.1777s0033 1.0kb upstream 1.0kb upstream 1000 false Scaffold1777: 161497-162496 Capsella grandiflora
Cagra.1777s0033 1.0kb downstream 1.0kb downstream 3302 true Scaffold1777: 162497-165798 Capsella grandiflora
Cagra.1777s0033 1.0kb downstream 1.0kb downstream 1000 false Scaffold1777: 164799-165798 Capsella grandiflora
Cagra.1777s0033 2.0kb upstream 2.0kb upstream 4302 true Scaffold1777: 160497-164798 Capsella grandiflora
Cagra.1777s0033 2.0kb upstream 2.0kb upstream 2000 false Scaffold1777: 160497-162496 Capsella grandiflora
Cagra.1777s0033 2.0kb downstream 2.0kb downstream 4302 true Scaffold1777: 162497-166798 Capsella grandiflora
Cagra.1777s0033 2.0kb downstream 2.0kb downstream 2000 false Scaffold1777: 164799-166798 Capsella grandiflora
Cagra.1777s0033 5.0kb upstream 5.0kb upstream 7302 true Scaffold1777: 157497-164798 Capsella grandiflora
Cagra.1777s0033 5.0kb upstream 5.0kb upstream 5000 false Scaffold1777: 157497-162496 Capsella grandiflora
Cagra.1777s0033 5.0kb downstream 5.0kb downstream 7302 true Scaffold1777: 162497-169798 Capsella grandiflora
Cagra.1777s0033 5.0kb downstream 5.0kb downstream 5000 false Scaffold1777: 164799-169798 Capsella grandiflora
Cagra.1777s0033 10.0kb upstream 10.0kb upstream 12302 true Scaffold1777: 152497-164798 Capsella grandiflora
Cagra.1777s0033 10.0kb upstream 10.0kb upstream 10000 false Scaffold1777: 152497-162496 Capsella grandiflora
Cagra.1777s0033 10.0kb downstream 10.0kb downstream 12302 true Scaffold1777: 162497-174798 Capsella grandiflora
Cagra.1777s0033 10.0kb downstream 10.0kb downstream 10000 false Scaffold1777: 164799-174798 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361299 5261 Brassicaceae View MSA
123832587 5264 Brassicales-Malvales View MSA
124343319 5266 SBM View MSA
124238820 5268 Malvidae View MSA
124060515 5270 Rosid View MSA
123747690 5271 Pentapetalae View MSA
122795038 5272 Eudicot View MSA
122050223 5273 Angiosperm View MSA
121351029 5274 Embryophyte View MSA
123381981 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain