Gene : Cagra.1796s0004 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31384:SF21 - AUXIN RESPONSE FACTOR 19-RELATED Genomic Order:  4
Name:  ? Cagra.1796s0004 Secondary Identifier:  ? PAC:28893996
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1796s0004 0.5kb upstream 0.5kb upstream 6192 true Scaffold1796: 10136-16327 Capsella grandiflora
Cagra.1796s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold1796: 10136-10635 Capsella grandiflora
Cagra.1796s0004 0.5kb downstream 0.5kb downstream 6192 true Scaffold1796: 10636-16827 Capsella grandiflora
Cagra.1796s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold1796: 16328-16827 Capsella grandiflora
Cagra.1796s0004 1.0kb upstream 1.0kb upstream 6692 true Scaffold1796: 9636-16327 Capsella grandiflora
Cagra.1796s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold1796: 9636-10635 Capsella grandiflora
Cagra.1796s0004 1.0kb downstream 1.0kb downstream 6692 true Scaffold1796: 10636-17327 Capsella grandiflora
Cagra.1796s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold1796: 16328-17327 Capsella grandiflora
Cagra.1796s0004 2.0kb upstream 2.0kb upstream 7692 true Scaffold1796: 8636-16327 Capsella grandiflora
Cagra.1796s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold1796: 8636-10635 Capsella grandiflora
Cagra.1796s0004 2.0kb downstream 2.0kb downstream 7692 true Scaffold1796: 10636-18327 Capsella grandiflora
Cagra.1796s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold1796: 16328-18327 Capsella grandiflora
Cagra.1796s0004 5.0kb upstream 5.0kb upstream 10692 true Scaffold1796: 5636-16327 Capsella grandiflora
Cagra.1796s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold1796: 5636-10635 Capsella grandiflora
Cagra.1796s0004 5.0kb downstream 5.0kb downstream 10692 true Scaffold1796: 10636-21327 Capsella grandiflora
Cagra.1796s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold1796: 16328-21327 Capsella grandiflora
Cagra.1796s0004 10.0kb upstream 10.0kb upstream 15692 true Scaffold1796: 636-16327 Capsella grandiflora
Cagra.1796s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold1796: 636-10635 Capsella grandiflora
Cagra.1796s0004 10.0kb downstream 10.0kb downstream 15692 true Scaffold1796: 10636-26327 Capsella grandiflora
Cagra.1796s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold1796: 16328-26327 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361440 5261 Brassicaceae View MSA
123840028 5264 Brassicales-Malvales View MSA
124351117 5266 SBM View MSA
124251074 5268 Malvidae View MSA
124073682 5270 Rosid View MSA
123741284 5271 Pentapetalae View MSA
122791344 5272 Eudicot View MSA
122042731 5273 Angiosperm View MSA
121351367 5274 Embryophyte View MSA
123382140 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain