Gene : Cagra.1822s0007 C. grandiflora v1.1
Defline:  (1 of 1) PTHR33873:SF1 - TRANSCRIPTION FACTOR VOZ1 Genomic Order:  7
Name:  ? Cagra.1822s0007 Secondary Identifier:  ? PAC:28905114
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1822s0007 0.5kb upstream 0.5kb upstream 3288 true Scaffold1822: 18083-21370 Capsella grandiflora
Cagra.1822s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold1822: 20871-21370 Capsella grandiflora
Cagra.1822s0007 0.5kb downstream 0.5kb downstream 3288 true Scaffold1822: 17583-20870 Capsella grandiflora
Cagra.1822s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold1822: 17583-18082 Capsella grandiflora
Cagra.1822s0007 1.0kb upstream 1.0kb upstream 3788 true Scaffold1822: 18083-21870 Capsella grandiflora
Cagra.1822s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold1822: 20871-21870 Capsella grandiflora
Cagra.1822s0007 1.0kb downstream 1.0kb downstream 3788 true Scaffold1822: 17083-20870 Capsella grandiflora
Cagra.1822s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold1822: 17083-18082 Capsella grandiflora
Cagra.1822s0007 2.0kb upstream 2.0kb upstream 4788 true Scaffold1822: 18083-22870 Capsella grandiflora
Cagra.1822s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold1822: 20871-22870 Capsella grandiflora
Cagra.1822s0007 2.0kb downstream 2.0kb downstream 4788 true Scaffold1822: 16083-20870 Capsella grandiflora
Cagra.1822s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold1822: 16083-18082 Capsella grandiflora
Cagra.1822s0007 5.0kb upstream 5.0kb upstream 7788 true Scaffold1822: 18083-25870 Capsella grandiflora
Cagra.1822s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold1822: 20871-25870 Capsella grandiflora
Cagra.1822s0007 5.0kb downstream 5.0kb downstream 7788 true Scaffold1822: 13083-20870 Capsella grandiflora
Cagra.1822s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold1822: 13083-18082 Capsella grandiflora
Cagra.1822s0007 10.0kb upstream 10.0kb upstream 12788 true Scaffold1822: 18083-30870 Capsella grandiflora
Cagra.1822s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold1822: 20871-30870 Capsella grandiflora
Cagra.1822s0007 10.0kb downstream 10.0kb downstream 12788 true Scaffold1822: 8083-20870 Capsella grandiflora
Cagra.1822s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold1822: 8083-18082 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360241 5261 Brassicaceae View MSA
123827953 5264 Brassicales-Malvales View MSA
124343082 5266 SBM View MSA
124247541 5268 Malvidae View MSA
124066720 5270 Rosid View MSA
123737932 5271 Pentapetalae View MSA
122797844 5272 Eudicot View MSA
122043421 5273 Angiosperm View MSA
121348934 5274 Embryophyte View MSA
123381085 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain