Gene : Cagra.1742s0038 C. grandiflora v1.1
Defline:  (1 of 2) PTHR22950:SF240 - TRANSMEMBRANE AMINO ACID TRANSPORTER-RELATED Genomic Order:  38
Name:  ? Cagra.1742s0038 Secondary Identifier:  ? PAC:28910576
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1742s0038 0.5kb upstream 0.5kb upstream 4842 true Scaffold1742: 156096-160937 Capsella grandiflora
Cagra.1742s0038 0.5kb upstream 0.5kb upstream 500 false Scaffold1742: 156096-156595 Capsella grandiflora
Cagra.1742s0038 0.5kb downstream 0.5kb downstream 4842 true Scaffold1742: 156596-161437 Capsella grandiflora
Cagra.1742s0038 0.5kb downstream 0.5kb downstream 500 false Scaffold1742: 160938-161437 Capsella grandiflora
Cagra.1742s0038 1.0kb upstream 1.0kb upstream 5342 true Scaffold1742: 155596-160937 Capsella grandiflora
Cagra.1742s0038 1.0kb upstream 1.0kb upstream 1000 false Scaffold1742: 155596-156595 Capsella grandiflora
Cagra.1742s0038 1.0kb downstream 1.0kb downstream 5342 true Scaffold1742: 156596-161937 Capsella grandiflora
Cagra.1742s0038 1.0kb downstream 1.0kb downstream 1000 false Scaffold1742: 160938-161937 Capsella grandiflora
Cagra.1742s0038 2.0kb upstream 2.0kb upstream 6342 true Scaffold1742: 154596-160937 Capsella grandiflora
Cagra.1742s0038 2.0kb upstream 2.0kb upstream 2000 false Scaffold1742: 154596-156595 Capsella grandiflora
Cagra.1742s0038 2.0kb downstream 2.0kb downstream 6342 true Scaffold1742: 156596-162937 Capsella grandiflora
Cagra.1742s0038 2.0kb downstream 2.0kb downstream 2000 false Scaffold1742: 160938-162937 Capsella grandiflora
Cagra.1742s0038 5.0kb upstream 5.0kb upstream 9342 true Scaffold1742: 151596-160937 Capsella grandiflora
Cagra.1742s0038 5.0kb upstream 5.0kb upstream 5000 false Scaffold1742: 151596-156595 Capsella grandiflora
Cagra.1742s0038 5.0kb downstream 5.0kb downstream 9342 true Scaffold1742: 156596-165937 Capsella grandiflora
Cagra.1742s0038 5.0kb downstream 5.0kb downstream 5000 false Scaffold1742: 160938-165937 Capsella grandiflora
Cagra.1742s0038 10.0kb upstream 10.0kb upstream 14342 true Scaffold1742: 146596-160937 Capsella grandiflora
Cagra.1742s0038 10.0kb upstream 10.0kb upstream 10000 false Scaffold1742: 146596-156595 Capsella grandiflora
Cagra.1742s0038 10.0kb downstream 10.0kb downstream 14342 true Scaffold1742: 156596-170937 Capsella grandiflora
Cagra.1742s0038 10.0kb downstream 10.0kb downstream 10000 false Scaffold1742: 160938-170937 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374006 5261 Brassicaceae View MSA
123800665 5264 Brassicales-Malvales View MSA
124298055 5266 SBM View MSA
124149795 5268 Malvidae View MSA
123875533 5270 Rosid View MSA
123459335 5271 Pentapetalae View MSA
122494727 5272 Eudicot View MSA
122050911 5273 Angiosperm View MSA
123429000 5275 Viridiplantae View MSA
121351519 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain