Gene : Cagra.1744s0005 C. grandiflora v1.1
Defline:  (1 of 4) PF09177 - Syntaxin 6, N-terminal (Syntaxin-6_N) Genomic Order:  5
Name:  ? Cagra.1744s0005 Secondary Identifier:  ? PAC:28915077
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1744s0005 0.5kb upstream 0.5kb upstream 2584 true Scaffold1744: 22339-24922 Capsella grandiflora
Cagra.1744s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold1744: 22339-22838 Capsella grandiflora
Cagra.1744s0005 0.5kb downstream 0.5kb downstream 2584 true Scaffold1744: 22839-25422 Capsella grandiflora
Cagra.1744s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold1744: 24923-25422 Capsella grandiflora
Cagra.1744s0005 1.0kb upstream 1.0kb upstream 3084 true Scaffold1744: 21839-24922 Capsella grandiflora
Cagra.1744s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold1744: 21839-22838 Capsella grandiflora
Cagra.1744s0005 1.0kb downstream 1.0kb downstream 3084 true Scaffold1744: 22839-25922 Capsella grandiflora
Cagra.1744s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold1744: 24923-25922 Capsella grandiflora
Cagra.1744s0005 2.0kb upstream 2.0kb upstream 4084 true Scaffold1744: 20839-24922 Capsella grandiflora
Cagra.1744s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold1744: 20839-22838 Capsella grandiflora
Cagra.1744s0005 2.0kb downstream 2.0kb downstream 4084 true Scaffold1744: 22839-26922 Capsella grandiflora
Cagra.1744s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold1744: 24923-26922 Capsella grandiflora
Cagra.1744s0005 5.0kb upstream 5.0kb upstream 7084 true Scaffold1744: 17839-24922 Capsella grandiflora
Cagra.1744s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold1744: 17839-22838 Capsella grandiflora
Cagra.1744s0005 5.0kb downstream 5.0kb downstream 7084 true Scaffold1744: 22839-29922 Capsella grandiflora
Cagra.1744s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold1744: 24923-29922 Capsella grandiflora
Cagra.1744s0005 10.0kb upstream 10.0kb upstream 12084 true Scaffold1744: 12839-24922 Capsella grandiflora
Cagra.1744s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold1744: 12839-22838 Capsella grandiflora
Cagra.1744s0005 10.0kb downstream 10.0kb downstream 12084 true Scaffold1744: 22839-34922 Capsella grandiflora
Cagra.1744s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold1744: 24923-34922 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378080 5261 Brassicaceae View MSA
123840621 5264 Brassicales-Malvales View MSA
124346363 5266 SBM View MSA
124243646 5268 Malvidae View MSA
124050806 5270 Rosid View MSA
123751797 5271 Pentapetalae View MSA
122791749 5272 Eudicot View MSA
122042907 5273 Angiosperm View MSA
121348883 5274 Embryophyte View MSA
123381058 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain