Gene : Cagra.1744s0002 C. grandiflora v1.1
Defline:  (1 of 10) PTHR31062:SF20 - XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 14-RELATED Genomic Order:  2
Name:  ? Cagra.1744s0002 Secondary Identifier:  ? PAC:28915065
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1744s0002 0.5kb upstream 0.5kb upstream 1787 true Scaffold1744: 11577-13363 Capsella grandiflora
Cagra.1744s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold1744: 11577-12076 Capsella grandiflora
Cagra.1744s0002 0.5kb downstream 0.5kb downstream 1787 true Scaffold1744: 12077-13863 Capsella grandiflora
Cagra.1744s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold1744: 13364-13863 Capsella grandiflora
Cagra.1744s0002 1.0kb upstream 1.0kb upstream 2287 true Scaffold1744: 11077-13363 Capsella grandiflora
Cagra.1744s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold1744: 11077-12076 Capsella grandiflora
Cagra.1744s0002 1.0kb downstream 1.0kb downstream 2287 true Scaffold1744: 12077-14363 Capsella grandiflora
Cagra.1744s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold1744: 13364-14363 Capsella grandiflora
Cagra.1744s0002 2.0kb upstream 2.0kb upstream 3287 true Scaffold1744: 10077-13363 Capsella grandiflora
Cagra.1744s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold1744: 10077-12076 Capsella grandiflora
Cagra.1744s0002 2.0kb downstream 2.0kb downstream 3287 true Scaffold1744: 12077-15363 Capsella grandiflora
Cagra.1744s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold1744: 13364-15363 Capsella grandiflora
Cagra.1744s0002 5.0kb upstream 5.0kb upstream 6287 true Scaffold1744: 7077-13363 Capsella grandiflora
Cagra.1744s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold1744: 7077-12076 Capsella grandiflora
Cagra.1744s0002 5.0kb downstream 5.0kb downstream 6287 true Scaffold1744: 12077-18363 Capsella grandiflora
Cagra.1744s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold1744: 13364-18363 Capsella grandiflora
Cagra.1744s0002 10.0kb upstream 10.0kb upstream 11287 true Scaffold1744: 2077-13363 Capsella grandiflora
Cagra.1744s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold1744: 2077-12076 Capsella grandiflora
Cagra.1744s0002 10.0kb downstream 10.0kb downstream 11287 true Scaffold1744: 12077-23363 Capsella grandiflora
Cagra.1744s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold1744: 13364-23363 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377076 5261 Brassicaceae View MSA
123840793 5264 Brassicales-Malvales View MSA
124350443 5266 SBM View MSA
124251513 5268 Malvidae View MSA
124074397 5270 Rosid View MSA
123749278 5271 Pentapetalae View MSA
122796709 5272 Eudicot View MSA
122046395 5273 Angiosperm View MSA
121350333 5274 Embryophyte View MSA
123381682 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain