Gene : Cagra.1752s0002 C. grandiflora v1.1
Defline:  (1 of 2) KOG3306 - Predicted membrane protein Genomic Order:  2
Name:  ? Cagra.1752s0002 Secondary Identifier:  ? PAC:28896324
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1752s0002 0.5kb upstream 0.5kb upstream 2642 true Scaffold1752: 6596-9237 Capsella grandiflora
Cagra.1752s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold1752: 6596-7095 Capsella grandiflora
Cagra.1752s0002 0.5kb downstream 0.5kb downstream 2642 true Scaffold1752: 7096-9737 Capsella grandiflora
Cagra.1752s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold1752: 9238-9737 Capsella grandiflora
Cagra.1752s0002 1.0kb upstream 1.0kb upstream 3142 true Scaffold1752: 6096-9237 Capsella grandiflora
Cagra.1752s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold1752: 6096-7095 Capsella grandiflora
Cagra.1752s0002 1.0kb downstream 1.0kb downstream 3142 true Scaffold1752: 7096-10237 Capsella grandiflora
Cagra.1752s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold1752: 9238-10237 Capsella grandiflora
Cagra.1752s0002 2.0kb upstream 2.0kb upstream 4142 true Scaffold1752: 5096-9237 Capsella grandiflora
Cagra.1752s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold1752: 5096-7095 Capsella grandiflora
Cagra.1752s0002 2.0kb downstream 2.0kb downstream 4142 true Scaffold1752: 7096-11237 Capsella grandiflora
Cagra.1752s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold1752: 9238-11237 Capsella grandiflora
Cagra.1752s0002 5.0kb upstream 5.0kb upstream 7142 true Scaffold1752: 2096-9237 Capsella grandiflora
Cagra.1752s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold1752: 2096-7095 Capsella grandiflora
Cagra.1752s0002 5.0kb downstream 5.0kb downstream 7142 true Scaffold1752: 7096-14237 Capsella grandiflora
Cagra.1752s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold1752: 9238-14237 Capsella grandiflora
Cagra.1752s0002 10.0kb upstream 10.0kb upstream 9237 true Scaffold1752: 1-9237 Capsella grandiflora
Cagra.1752s0002 10.0kb upstream 10.0kb upstream 7095 false Scaffold1752: 1-7095 Capsella grandiflora
Cagra.1752s0002 10.0kb downstream 10.0kb downstream 12142 true Scaffold1752: 7096-19237 Capsella grandiflora
Cagra.1752s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold1752: 9238-19237 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360256 5261 Brassicaceae View MSA
123840648 5264 Brassicales-Malvales View MSA
124343865 5266 SBM View MSA
124238915 5268 Malvidae View MSA
124061047 5270 Rosid View MSA
123750181 5271 Pentapetalae View MSA
122793611 5272 Eudicot View MSA
122047015 5273 Angiosperm View MSA
121345754 5274 Embryophyte View MSA
123424414 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain