Gene : Cagra.1752s0001 C. grandiflora v1.1
Defline:  (1 of 8) PTHR36312:SF1 - PLANT THIONIN FAMILY PROTEIN-RELATED Genomic Order:  1
Name:  ? Cagra.1752s0001 Secondary Identifier:  ? PAC:28896323
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1752s0001 0.5kb upstream 0.5kb upstream 1012 true Scaffold1752: 5371-6382 Capsella grandiflora
Cagra.1752s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold1752: 5883-6382 Capsella grandiflora
Cagra.1752s0001 0.5kb downstream 0.5kb downstream 1012 true Scaffold1752: 4871-5882 Capsella grandiflora
Cagra.1752s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold1752: 4871-5370 Capsella grandiflora
Cagra.1752s0001 1.0kb upstream 1.0kb upstream 1512 true Scaffold1752: 5371-6882 Capsella grandiflora
Cagra.1752s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold1752: 5883-6882 Capsella grandiflora
Cagra.1752s0001 1.0kb downstream 1.0kb downstream 1512 true Scaffold1752: 4371-5882 Capsella grandiflora
Cagra.1752s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold1752: 4371-5370 Capsella grandiflora
Cagra.1752s0001 2.0kb upstream 2.0kb upstream 2512 true Scaffold1752: 5371-7882 Capsella grandiflora
Cagra.1752s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold1752: 5883-7882 Capsella grandiflora
Cagra.1752s0001 2.0kb downstream 2.0kb downstream 2512 true Scaffold1752: 3371-5882 Capsella grandiflora
Cagra.1752s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold1752: 3371-5370 Capsella grandiflora
Cagra.1752s0001 5.0kb upstream 5.0kb upstream 5512 true Scaffold1752: 5371-10882 Capsella grandiflora
Cagra.1752s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold1752: 5883-10882 Capsella grandiflora
Cagra.1752s0001 5.0kb downstream 5.0kb downstream 5512 true Scaffold1752: 371-5882 Capsella grandiflora
Cagra.1752s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold1752: 371-5370 Capsella grandiflora
Cagra.1752s0001 10.0kb upstream 10.0kb upstream 10512 true Scaffold1752: 5371-15882 Capsella grandiflora
Cagra.1752s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold1752: 5883-15882 Capsella grandiflora
Cagra.1752s0001 10.0kb downstream 10.0kb downstream 5882 true Scaffold1752: 1-5882 Capsella grandiflora
Cagra.1752s0001 10.0kb downstream 10.0kb downstream 5370 false Scaffold1752: 1-5370 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029035 5273 Angiosperm View MSA
122379758 5261 Brassicaceae View MSA
123839751 5264 Brassicales-Malvales View MSA
124350521 5266 SBM View MSA
124252249 5268 Malvidae View MSA
124064967 5270 Rosid View MSA
123741285 5271 Pentapetalae View MSA
122796871 5272 Eudicot View MSA
121298442 5274 Embryophyte View MSA
123336415 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain