Gene : Cagra.1757s0018 C. grandiflora v1.1
Defline:  (1 of 1) PF07303 - Occludin homology domain (Occludin_ELL) Genomic Order:  18
Name:  ? Cagra.1757s0018 Secondary Identifier:  ? PAC:28909820
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1757s0018 0.5kb upstream 0.5kb upstream 7468 true Scaffold1757: 88604-96071 Capsella grandiflora
Cagra.1757s0018 0.5kb upstream 0.5kb upstream 500 false Scaffold1757: 88604-89103 Capsella grandiflora
Cagra.1757s0018 0.5kb downstream 0.5kb downstream 7468 true Scaffold1757: 89104-96571 Capsella grandiflora
Cagra.1757s0018 0.5kb downstream 0.5kb downstream 500 false Scaffold1757: 96072-96571 Capsella grandiflora
Cagra.1757s0018 1.0kb upstream 1.0kb upstream 7968 true Scaffold1757: 88104-96071 Capsella grandiflora
Cagra.1757s0018 1.0kb upstream 1.0kb upstream 1000 false Scaffold1757: 88104-89103 Capsella grandiflora
Cagra.1757s0018 1.0kb downstream 1.0kb downstream 7968 true Scaffold1757: 89104-97071 Capsella grandiflora
Cagra.1757s0018 1.0kb downstream 1.0kb downstream 1000 false Scaffold1757: 96072-97071 Capsella grandiflora
Cagra.1757s0018 2.0kb upstream 2.0kb upstream 8968 true Scaffold1757: 87104-96071 Capsella grandiflora
Cagra.1757s0018 2.0kb upstream 2.0kb upstream 2000 false Scaffold1757: 87104-89103 Capsella grandiflora
Cagra.1757s0018 2.0kb downstream 2.0kb downstream 8968 true Scaffold1757: 89104-98071 Capsella grandiflora
Cagra.1757s0018 2.0kb downstream 2.0kb downstream 2000 false Scaffold1757: 96072-98071 Capsella grandiflora
Cagra.1757s0018 5.0kb upstream 5.0kb upstream 11968 true Scaffold1757: 84104-96071 Capsella grandiflora
Cagra.1757s0018 5.0kb upstream 5.0kb upstream 5000 false Scaffold1757: 84104-89103 Capsella grandiflora
Cagra.1757s0018 5.0kb downstream 5.0kb downstream 11968 true Scaffold1757: 89104-101071 Capsella grandiflora
Cagra.1757s0018 5.0kb downstream 5.0kb downstream 5000 false Scaffold1757: 96072-101071 Capsella grandiflora
Cagra.1757s0018 10.0kb upstream 10.0kb upstream 16968 true Scaffold1757: 79104-96071 Capsella grandiflora
Cagra.1757s0018 10.0kb upstream 10.0kb upstream 10000 false Scaffold1757: 79104-89103 Capsella grandiflora
Cagra.1757s0018 10.0kb downstream 10.0kb downstream 16968 true Scaffold1757: 89104-106071 Capsella grandiflora
Cagra.1757s0018 10.0kb downstream 10.0kb downstream 10000 false Scaffold1757: 96072-106071 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367269 5261 Brassicaceae View MSA
123831791 5264 Brassicales-Malvales View MSA
124340432 5266 SBM View MSA
124238795 5268 Malvidae View MSA
124069075 5270 Rosid View MSA
123739076 5271 Pentapetalae View MSA
122788954 5272 Eudicot View MSA
122042901 5273 Angiosperm View MSA
121344929 5274 Embryophyte View MSA
123380129 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain