Gene : Cagra.1772s0009 C. grandiflora v1.1
Defline:  (1 of 2) PTHR22814:SF5 - F10A16.22 PROTEIN Genomic Order:  9
Name:  ? Cagra.1772s0009 Secondary Identifier:  ? PAC:28906940
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1772s0009 0.5kb upstream 0.5kb upstream 1064 true Scaffold1772: 22503-23566 Capsella grandiflora
Cagra.1772s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold1772: 23067-23566 Capsella grandiflora
Cagra.1772s0009 0.5kb downstream 0.5kb downstream 1064 true Scaffold1772: 22003-23066 Capsella grandiflora
Cagra.1772s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold1772: 22003-22502 Capsella grandiflora
Cagra.1772s0009 1.0kb upstream 1.0kb upstream 1564 true Scaffold1772: 22503-24066 Capsella grandiflora
Cagra.1772s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold1772: 23067-24066 Capsella grandiflora
Cagra.1772s0009 1.0kb downstream 1.0kb downstream 1564 true Scaffold1772: 21503-23066 Capsella grandiflora
Cagra.1772s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold1772: 21503-22502 Capsella grandiflora
Cagra.1772s0009 2.0kb upstream 2.0kb upstream 2564 true Scaffold1772: 22503-25066 Capsella grandiflora
Cagra.1772s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold1772: 23067-25066 Capsella grandiflora
Cagra.1772s0009 2.0kb downstream 2.0kb downstream 2564 true Scaffold1772: 20503-23066 Capsella grandiflora
Cagra.1772s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold1772: 20503-22502 Capsella grandiflora
Cagra.1772s0009 5.0kb upstream 5.0kb upstream 5564 true Scaffold1772: 22503-28066 Capsella grandiflora
Cagra.1772s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold1772: 23067-28066 Capsella grandiflora
Cagra.1772s0009 5.0kb downstream 5.0kb downstream 5564 true Scaffold1772: 17503-23066 Capsella grandiflora
Cagra.1772s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold1772: 17503-22502 Capsella grandiflora
Cagra.1772s0009 10.0kb upstream 10.0kb upstream 10564 true Scaffold1772: 22503-33066 Capsella grandiflora
Cagra.1772s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold1772: 23067-33066 Capsella grandiflora
Cagra.1772s0009 10.0kb downstream 10.0kb downstream 10564 true Scaffold1772: 12503-23066 Capsella grandiflora
Cagra.1772s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold1772: 12503-22502 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360369 5261 Brassicaceae View MSA
123836260 5264 Brassicales-Malvales View MSA
124344909 5266 SBM View MSA
124253793 5268 Malvidae View MSA
124070077 5270 Rosid View MSA
123749525 5271 Pentapetalae View MSA
122797492 5272 Eudicot View MSA
122051560 5273 Angiosperm View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain