Gene : Cagra.1704s0005 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10217:SF544 - CYCLIC NUCLEOTIDE-GATED ION CHANNEL 14-RELATED Genomic Order:  5
Name:  ? Cagra.1704s0005 Secondary Identifier:  ? PAC:28903848
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1704s0005 0.5kb upstream 0.5kb upstream 3964 true Scaffold1704: 21517-25480 Capsella grandiflora
Cagra.1704s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold1704: 21517-22016 Capsella grandiflora
Cagra.1704s0005 0.5kb downstream 0.5kb downstream 3964 true Scaffold1704: 22017-25980 Capsella grandiflora
Cagra.1704s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold1704: 25481-25980 Capsella grandiflora
Cagra.1704s0005 1.0kb upstream 1.0kb upstream 4464 true Scaffold1704: 21017-25480 Capsella grandiflora
Cagra.1704s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold1704: 21017-22016 Capsella grandiflora
Cagra.1704s0005 1.0kb downstream 1.0kb downstream 4464 true Scaffold1704: 22017-26480 Capsella grandiflora
Cagra.1704s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold1704: 25481-26480 Capsella grandiflora
Cagra.1704s0005 2.0kb upstream 2.0kb upstream 5464 true Scaffold1704: 20017-25480 Capsella grandiflora
Cagra.1704s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold1704: 20017-22016 Capsella grandiflora
Cagra.1704s0005 2.0kb downstream 2.0kb downstream 5464 true Scaffold1704: 22017-27480 Capsella grandiflora
Cagra.1704s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold1704: 25481-27480 Capsella grandiflora
Cagra.1704s0005 5.0kb upstream 5.0kb upstream 8464 true Scaffold1704: 17017-25480 Capsella grandiflora
Cagra.1704s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold1704: 17017-22016 Capsella grandiflora
Cagra.1704s0005 5.0kb downstream 5.0kb downstream 8464 true Scaffold1704: 22017-30480 Capsella grandiflora
Cagra.1704s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold1704: 25481-30480 Capsella grandiflora
Cagra.1704s0005 10.0kb upstream 10.0kb upstream 13464 true Scaffold1704: 12017-25480 Capsella grandiflora
Cagra.1704s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold1704: 12017-22016 Capsella grandiflora
Cagra.1704s0005 10.0kb downstream 10.0kb downstream 11797 true Scaffold1704: 22017-33813 Capsella grandiflora
Cagra.1704s0005 10.0kb downstream 10.0kb downstream 8333 false Scaffold1704: 25481-33813 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041490 5273 Angiosperm View MSA
122365763 5261 Brassicaceae View MSA
123827819 5264 Brassicales-Malvales View MSA
124352036 5266 SBM View MSA
124240070 5268 Malvidae View MSA
124073403 5270 Rosid View MSA
123747107 5271 Pentapetalae View MSA
122792156 5272 Eudicot View MSA
121351754 5274 Embryophyte View MSA
123428762 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain