Gene : Cagra.1707s0002 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10174//PTHR10174:SF148 - RETINALDEHYDE BINDING PROTEIN-RELATED Genomic Order:  2
Name:  ? Cagra.1707s0002 Secondary Identifier:  ? PAC:28906755
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1707s0002 0.5kb upstream 0.5kb upstream 2410 true Scaffold1707: 10559-12968 Capsella grandiflora
Cagra.1707s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold1707: 10559-11058 Capsella grandiflora
Cagra.1707s0002 0.5kb downstream 0.5kb downstream 2410 true Scaffold1707: 11059-13468 Capsella grandiflora
Cagra.1707s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold1707: 12969-13468 Capsella grandiflora
Cagra.1707s0002 1.0kb upstream 1.0kb upstream 2910 true Scaffold1707: 10059-12968 Capsella grandiflora
Cagra.1707s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold1707: 10059-11058 Capsella grandiflora
Cagra.1707s0002 1.0kb downstream 1.0kb downstream 2910 true Scaffold1707: 11059-13968 Capsella grandiflora
Cagra.1707s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold1707: 12969-13968 Capsella grandiflora
Cagra.1707s0002 2.0kb upstream 2.0kb upstream 3910 true Scaffold1707: 9059-12968 Capsella grandiflora
Cagra.1707s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold1707: 9059-11058 Capsella grandiflora
Cagra.1707s0002 2.0kb downstream 2.0kb downstream 3910 true Scaffold1707: 11059-14968 Capsella grandiflora
Cagra.1707s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold1707: 12969-14968 Capsella grandiflora
Cagra.1707s0002 5.0kb upstream 5.0kb upstream 6910 true Scaffold1707: 6059-12968 Capsella grandiflora
Cagra.1707s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold1707: 6059-11058 Capsella grandiflora
Cagra.1707s0002 5.0kb downstream 5.0kb downstream 6910 true Scaffold1707: 11059-17968 Capsella grandiflora
Cagra.1707s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold1707: 12969-17968 Capsella grandiflora
Cagra.1707s0002 10.0kb upstream 10.0kb upstream 11910 true Scaffold1707: 1059-12968 Capsella grandiflora
Cagra.1707s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold1707: 1059-11058 Capsella grandiflora
Cagra.1707s0002 10.0kb downstream 10.0kb downstream 11910 true Scaffold1707: 11059-22968 Capsella grandiflora
Cagra.1707s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold1707: 12969-22968 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360889 5261 Brassicaceae View MSA
123836952 5264 Brassicales-Malvales View MSA
124340446 5266 SBM View MSA
124237865 5268 Malvidae View MSA
124071826 5270 Rosid View MSA
123742698 5271 Pentapetalae View MSA
122787147 5272 Eudicot View MSA
122046341 5273 Angiosperm View MSA
121350309 5274 Embryophyte View MSA
123427540 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain