Gene : Cagra.1718s0002 C. grandiflora v1.1
Defline:  (1 of 2) PTHR23042:SF72 - TRANSCRIPTION FACTOR BHLH104-RELATED Genomic Order:  2
Name:  ? Cagra.1718s0002 Secondary Identifier:  ? PAC:28896642
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1718s0002 0.5kb upstream 0.5kb upstream 2188 true Scaffold1718: 5639-7826 Capsella grandiflora
Cagra.1718s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold1718: 5639-6138 Capsella grandiflora
Cagra.1718s0002 0.5kb downstream 0.5kb downstream 2188 true Scaffold1718: 6139-8326 Capsella grandiflora
Cagra.1718s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold1718: 7827-8326 Capsella grandiflora
Cagra.1718s0002 1.0kb upstream 1.0kb upstream 2688 true Scaffold1718: 5139-7826 Capsella grandiflora
Cagra.1718s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold1718: 5139-6138 Capsella grandiflora
Cagra.1718s0002 1.0kb downstream 1.0kb downstream 2688 true Scaffold1718: 6139-8826 Capsella grandiflora
Cagra.1718s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold1718: 7827-8826 Capsella grandiflora
Cagra.1718s0002 2.0kb upstream 2.0kb upstream 3688 true Scaffold1718: 4139-7826 Capsella grandiflora
Cagra.1718s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold1718: 4139-6138 Capsella grandiflora
Cagra.1718s0002 2.0kb downstream 2.0kb downstream 3688 true Scaffold1718: 6139-9826 Capsella grandiflora
Cagra.1718s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold1718: 7827-9826 Capsella grandiflora
Cagra.1718s0002 5.0kb upstream 5.0kb upstream 6688 true Scaffold1718: 1139-7826 Capsella grandiflora
Cagra.1718s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold1718: 1139-6138 Capsella grandiflora
Cagra.1718s0002 5.0kb downstream 5.0kb downstream 6688 true Scaffold1718: 6139-12826 Capsella grandiflora
Cagra.1718s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold1718: 7827-12826 Capsella grandiflora
Cagra.1718s0002 10.0kb upstream 10.0kb upstream 7826 true Scaffold1718: 1-7826 Capsella grandiflora
Cagra.1718s0002 10.0kb upstream 10.0kb upstream 6138 false Scaffold1718: 1-6138 Capsella grandiflora
Cagra.1718s0002 10.0kb downstream 10.0kb downstream 11688 true Scaffold1718: 6139-17826 Capsella grandiflora
Cagra.1718s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold1718: 7827-17826 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368994 5261 Brassicaceae View MSA
123834177 5264 Brassicales-Malvales View MSA
124349370 5266 SBM View MSA
124244215 5268 Malvidae View MSA
124074840 5270 Rosid View MSA
123739971 5271 Pentapetalae View MSA
122794387 5272 Eudicot View MSA
122050434 5273 Angiosperm View MSA
121311906 5274 Embryophyte View MSA
123427389 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain