Gene : Cagra.1718s0016 C. grandiflora v1.1
Defline:  (1 of 3) PTHR31734:SF30 - AUXIN-RESPONSIVE PROTEIN IAA14-RELATED Genomic Order:  16
Name:  ? Cagra.1718s0016 Secondary Identifier:  ? PAC:28896638
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1718s0016 0.5kb upstream 0.5kb upstream 2246 true Scaffold1718: 51274-53519 Capsella grandiflora
Cagra.1718s0016 0.5kb upstream 0.5kb upstream 500 false Scaffold1718: 53020-53519 Capsella grandiflora
Cagra.1718s0016 0.5kb downstream 0.5kb downstream 2246 true Scaffold1718: 50774-53019 Capsella grandiflora
Cagra.1718s0016 0.5kb downstream 0.5kb downstream 500 false Scaffold1718: 50774-51273 Capsella grandiflora
Cagra.1718s0016 1.0kb upstream 1.0kb upstream 2746 true Scaffold1718: 51274-54019 Capsella grandiflora
Cagra.1718s0016 1.0kb upstream 1.0kb upstream 1000 false Scaffold1718: 53020-54019 Capsella grandiflora
Cagra.1718s0016 1.0kb downstream 1.0kb downstream 2746 true Scaffold1718: 50274-53019 Capsella grandiflora
Cagra.1718s0016 1.0kb downstream 1.0kb downstream 1000 false Scaffold1718: 50274-51273 Capsella grandiflora
Cagra.1718s0016 2.0kb upstream 2.0kb upstream 3746 true Scaffold1718: 51274-55019 Capsella grandiflora
Cagra.1718s0016 2.0kb upstream 2.0kb upstream 2000 false Scaffold1718: 53020-55019 Capsella grandiflora
Cagra.1718s0016 2.0kb downstream 2.0kb downstream 3746 true Scaffold1718: 49274-53019 Capsella grandiflora
Cagra.1718s0016 2.0kb downstream 2.0kb downstream 2000 false Scaffold1718: 49274-51273 Capsella grandiflora
Cagra.1718s0016 5.0kb upstream 5.0kb upstream 6746 true Scaffold1718: 51274-58019 Capsella grandiflora
Cagra.1718s0016 5.0kb upstream 5.0kb upstream 5000 false Scaffold1718: 53020-58019 Capsella grandiflora
Cagra.1718s0016 5.0kb downstream 5.0kb downstream 6746 true Scaffold1718: 46274-53019 Capsella grandiflora
Cagra.1718s0016 5.0kb downstream 5.0kb downstream 5000 false Scaffold1718: 46274-51273 Capsella grandiflora
Cagra.1718s0016 10.0kb upstream 10.0kb upstream 11746 true Scaffold1718: 51274-63019 Capsella grandiflora
Cagra.1718s0016 10.0kb upstream 10.0kb upstream 10000 false Scaffold1718: 53020-63019 Capsella grandiflora
Cagra.1718s0016 10.0kb downstream 10.0kb downstream 11746 true Scaffold1718: 41274-53019 Capsella grandiflora
Cagra.1718s0016 10.0kb downstream 10.0kb downstream 10000 false Scaffold1718: 41274-51273 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364489 5261 Brassicaceae View MSA
123840211 5264 Brassicales-Malvales View MSA
124349634 5266 SBM View MSA
124254131 5268 Malvidae View MSA
124071523 5270 Rosid View MSA
123744630 5271 Pentapetalae View MSA
122796049 5272 Eudicot View MSA
122042007 5273 Angiosperm View MSA
121309912 5274 Embryophyte View MSA
123347544 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain