Gene : Cagra.1718s0020 C. grandiflora v1.1
Defline:  (1 of 1) PF10189 - Conserved protein (DUF2356) (DUF2356) Genomic Order:  20
Name:  ? Cagra.1718s0020 Secondary Identifier:  ? PAC:28896633
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1718s0020 0.5kb upstream 0.5kb upstream 2858 true Scaffold1718: 87128-89985 Capsella grandiflora
Cagra.1718s0020 0.5kb upstream 0.5kb upstream 500 false Scaffold1718: 87128-87627 Capsella grandiflora
Cagra.1718s0020 0.5kb downstream 0.5kb downstream 2858 true Scaffold1718: 87628-90485 Capsella grandiflora
Cagra.1718s0020 0.5kb downstream 0.5kb downstream 500 false Scaffold1718: 89986-90485 Capsella grandiflora
Cagra.1718s0020 1.0kb upstream 1.0kb upstream 3358 true Scaffold1718: 86628-89985 Capsella grandiflora
Cagra.1718s0020 1.0kb upstream 1.0kb upstream 1000 false Scaffold1718: 86628-87627 Capsella grandiflora
Cagra.1718s0020 1.0kb downstream 1.0kb downstream 3358 true Scaffold1718: 87628-90985 Capsella grandiflora
Cagra.1718s0020 1.0kb downstream 1.0kb downstream 1000 false Scaffold1718: 89986-90985 Capsella grandiflora
Cagra.1718s0020 2.0kb upstream 2.0kb upstream 4358 true Scaffold1718: 85628-89985 Capsella grandiflora
Cagra.1718s0020 2.0kb upstream 2.0kb upstream 2000 false Scaffold1718: 85628-87627 Capsella grandiflora
Cagra.1718s0020 2.0kb downstream 2.0kb downstream 4358 true Scaffold1718: 87628-91985 Capsella grandiflora
Cagra.1718s0020 2.0kb downstream 2.0kb downstream 2000 false Scaffold1718: 89986-91985 Capsella grandiflora
Cagra.1718s0020 5.0kb upstream 5.0kb upstream 7358 true Scaffold1718: 82628-89985 Capsella grandiflora
Cagra.1718s0020 5.0kb upstream 5.0kb upstream 5000 false Scaffold1718: 82628-87627 Capsella grandiflora
Cagra.1718s0020 5.0kb downstream 5.0kb downstream 7358 true Scaffold1718: 87628-94985 Capsella grandiflora
Cagra.1718s0020 5.0kb downstream 5.0kb downstream 5000 false Scaffold1718: 89986-94985 Capsella grandiflora
Cagra.1718s0020 10.0kb upstream 10.0kb upstream 12358 true Scaffold1718: 77628-89985 Capsella grandiflora
Cagra.1718s0020 10.0kb upstream 10.0kb upstream 10000 false Scaffold1718: 77628-87627 Capsella grandiflora
Cagra.1718s0020 10.0kb downstream 10.0kb downstream 10703 true Scaffold1718: 87628-98330 Capsella grandiflora
Cagra.1718s0020 10.0kb downstream 10.0kb downstream 8345 false Scaffold1718: 89986-98330 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026317 5273 Angiosperm View MSA
122380429 5261 Brassicaceae View MSA
123831387 5264 Brassicales-Malvales View MSA
124340828 5266 SBM View MSA
124244231 5268 Malvidae View MSA
124037150 5270 Rosid View MSA
123745641 5271 Pentapetalae View MSA
122771584 5272 Eudicot View MSA
121296275 5274 Embryophyte View MSA
123334469 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain