Gene : Cagra.1718s0019 C. grandiflora v1.1
Defline:  (1 of 10) PTHR17985//PTHR17985:SF13 - SER/THR-RICH PROTEIN T10 IN DGCR REGION Genomic Order:  19
Name:  ? Cagra.1718s0019 Secondary Identifier:  ? PAC:28896630
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1718s0019 0.5kb upstream 0.5kb upstream 1669 true Scaffold1718: 84313-85981 Capsella grandiflora
Cagra.1718s0019 0.5kb upstream 0.5kb upstream 500 false Scaffold1718: 84313-84812 Capsella grandiflora
Cagra.1718s0019 0.5kb downstream 0.5kb downstream 1669 true Scaffold1718: 84813-86481 Capsella grandiflora
Cagra.1718s0019 0.5kb downstream 0.5kb downstream 500 false Scaffold1718: 85982-86481 Capsella grandiflora
Cagra.1718s0019 1.0kb upstream 1.0kb upstream 2169 true Scaffold1718: 83813-85981 Capsella grandiflora
Cagra.1718s0019 1.0kb upstream 1.0kb upstream 1000 false Scaffold1718: 83813-84812 Capsella grandiflora
Cagra.1718s0019 1.0kb downstream 1.0kb downstream 2169 true Scaffold1718: 84813-86981 Capsella grandiflora
Cagra.1718s0019 1.0kb downstream 1.0kb downstream 1000 false Scaffold1718: 85982-86981 Capsella grandiflora
Cagra.1718s0019 2.0kb upstream 2.0kb upstream 3169 true Scaffold1718: 82813-85981 Capsella grandiflora
Cagra.1718s0019 2.0kb upstream 2.0kb upstream 2000 false Scaffold1718: 82813-84812 Capsella grandiflora
Cagra.1718s0019 2.0kb downstream 2.0kb downstream 3169 true Scaffold1718: 84813-87981 Capsella grandiflora
Cagra.1718s0019 2.0kb downstream 2.0kb downstream 2000 false Scaffold1718: 85982-87981 Capsella grandiflora
Cagra.1718s0019 5.0kb upstream 5.0kb upstream 6169 true Scaffold1718: 79813-85981 Capsella grandiflora
Cagra.1718s0019 5.0kb upstream 5.0kb upstream 5000 false Scaffold1718: 79813-84812 Capsella grandiflora
Cagra.1718s0019 5.0kb downstream 5.0kb downstream 6169 true Scaffold1718: 84813-90981 Capsella grandiflora
Cagra.1718s0019 5.0kb downstream 5.0kb downstream 5000 false Scaffold1718: 85982-90981 Capsella grandiflora
Cagra.1718s0019 10.0kb upstream 10.0kb upstream 11169 true Scaffold1718: 74813-85981 Capsella grandiflora
Cagra.1718s0019 10.0kb upstream 10.0kb upstream 10000 false Scaffold1718: 74813-84812 Capsella grandiflora
Cagra.1718s0019 10.0kb downstream 10.0kb downstream 11169 true Scaffold1718: 84813-95981 Capsella grandiflora
Cagra.1718s0019 10.0kb downstream 10.0kb downstream 10000 false Scaffold1718: 85982-95981 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381256 5261 Brassicaceae View MSA
123803145 5264 Brassicales-Malvales View MSA
124300276 5266 SBM View MSA
124151492 5268 Malvidae View MSA
124064404 5270 Rosid View MSA
123753497 5271 Pentapetalae View MSA
122790502 5272 Eudicot View MSA
122045802 5273 Angiosperm View MSA
121346368 5274 Embryophyte View MSA
123428335 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain