Gene : Cagra.1742s0003 C. grandiflora v1.1
Defline:  (1 of 6) PTHR13872 - 60S RIBOSOMAL PROTEIN L35 Genomic Order:  3
Name:  ? Cagra.1742s0003 Secondary Identifier:  ? PAC:28910598
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1742s0003 0.5kb upstream 0.5kb upstream 1875 true Scaffold1742: 7077-8951 Capsella grandiflora
Cagra.1742s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold1742: 7077-7576 Capsella grandiflora
Cagra.1742s0003 0.5kb downstream 0.5kb downstream 1875 true Scaffold1742: 7577-9451 Capsella grandiflora
Cagra.1742s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold1742: 8952-9451 Capsella grandiflora
Cagra.1742s0003 1.0kb upstream 1.0kb upstream 2375 true Scaffold1742: 6577-8951 Capsella grandiflora
Cagra.1742s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold1742: 6577-7576 Capsella grandiflora
Cagra.1742s0003 1.0kb downstream 1.0kb downstream 2375 true Scaffold1742: 7577-9951 Capsella grandiflora
Cagra.1742s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold1742: 8952-9951 Capsella grandiflora
Cagra.1742s0003 2.0kb upstream 2.0kb upstream 3375 true Scaffold1742: 5577-8951 Capsella grandiflora
Cagra.1742s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold1742: 5577-7576 Capsella grandiflora
Cagra.1742s0003 2.0kb downstream 2.0kb downstream 3375 true Scaffold1742: 7577-10951 Capsella grandiflora
Cagra.1742s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold1742: 8952-10951 Capsella grandiflora
Cagra.1742s0003 5.0kb upstream 5.0kb upstream 6375 true Scaffold1742: 2577-8951 Capsella grandiflora
Cagra.1742s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold1742: 2577-7576 Capsella grandiflora
Cagra.1742s0003 5.0kb downstream 5.0kb downstream 6375 true Scaffold1742: 7577-13951 Capsella grandiflora
Cagra.1742s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold1742: 8952-13951 Capsella grandiflora
Cagra.1742s0003 10.0kb upstream 10.0kb upstream 8951 true Scaffold1742: 1-8951 Capsella grandiflora
Cagra.1742s0003 10.0kb upstream 10.0kb upstream 7576 false Scaffold1742: 1-7576 Capsella grandiflora
Cagra.1742s0003 10.0kb downstream 10.0kb downstream 11375 true Scaffold1742: 7577-18951 Capsella grandiflora
Cagra.1742s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold1742: 8952-18951 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381489 5261 Brassicaceae View MSA
123838883 5264 Brassicales-Malvales View MSA
124346540 5266 SBM View MSA
124251991 5268 Malvidae View MSA
124074061 5270 Rosid View MSA
123744654 5271 Pentapetalae View MSA
122786708 5272 Eudicot View MSA
122050445 5273 Angiosperm View MSA
121345704 5274 Embryophyte View MSA
123426654 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain