Gene : Cagra.1742s0017 C. grandiflora v1.1
Defline:  (1 of 2) PTHR22957:SF269 - RABGAP/TBC DOMAIN-CONTAINING PROTEIN Genomic Order:  17
Name:  ? Cagra.1742s0017 Secondary Identifier:  ? PAC:28910568
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1742s0017 0.5kb upstream 0.5kb upstream 6622 true Scaffold1742: 73294-79915 Capsella grandiflora
Cagra.1742s0017 0.5kb upstream 0.5kb upstream 500 false Scaffold1742: 73294-73793 Capsella grandiflora
Cagra.1742s0017 0.5kb downstream 0.5kb downstream 6622 true Scaffold1742: 73794-80415 Capsella grandiflora
Cagra.1742s0017 0.5kb downstream 0.5kb downstream 500 false Scaffold1742: 79916-80415 Capsella grandiflora
Cagra.1742s0017 1.0kb upstream 1.0kb upstream 7122 true Scaffold1742: 72794-79915 Capsella grandiflora
Cagra.1742s0017 1.0kb upstream 1.0kb upstream 1000 false Scaffold1742: 72794-73793 Capsella grandiflora
Cagra.1742s0017 1.0kb downstream 1.0kb downstream 7122 true Scaffold1742: 73794-80915 Capsella grandiflora
Cagra.1742s0017 1.0kb downstream 1.0kb downstream 1000 false Scaffold1742: 79916-80915 Capsella grandiflora
Cagra.1742s0017 2.0kb upstream 2.0kb upstream 8122 true Scaffold1742: 71794-79915 Capsella grandiflora
Cagra.1742s0017 2.0kb upstream 2.0kb upstream 2000 false Scaffold1742: 71794-73793 Capsella grandiflora
Cagra.1742s0017 2.0kb downstream 2.0kb downstream 8122 true Scaffold1742: 73794-81915 Capsella grandiflora
Cagra.1742s0017 2.0kb downstream 2.0kb downstream 2000 false Scaffold1742: 79916-81915 Capsella grandiflora
Cagra.1742s0017 5.0kb upstream 5.0kb upstream 11122 true Scaffold1742: 68794-79915 Capsella grandiflora
Cagra.1742s0017 5.0kb upstream 5.0kb upstream 5000 false Scaffold1742: 68794-73793 Capsella grandiflora
Cagra.1742s0017 5.0kb downstream 5.0kb downstream 11122 true Scaffold1742: 73794-84915 Capsella grandiflora
Cagra.1742s0017 5.0kb downstream 5.0kb downstream 5000 false Scaffold1742: 79916-84915 Capsella grandiflora
Cagra.1742s0017 10.0kb upstream 10.0kb upstream 16122 true Scaffold1742: 63794-79915 Capsella grandiflora
Cagra.1742s0017 10.0kb upstream 10.0kb upstream 10000 false Scaffold1742: 63794-73793 Capsella grandiflora
Cagra.1742s0017 10.0kb downstream 10.0kb downstream 16122 true Scaffold1742: 73794-89915 Capsella grandiflora
Cagra.1742s0017 10.0kb downstream 10.0kb downstream 10000 false Scaffold1742: 79916-89915 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367929 5261 Brassicaceae View MSA
123834893 5264 Brassicales-Malvales View MSA
124343165 5266 SBM View MSA
124239001 5268 Malvidae View MSA
124063524 5270 Rosid View MSA
123740176 5271 Pentapetalae View MSA
122795755 5272 Eudicot View MSA
122044400 5273 Angiosperm View MSA
121345248 5274 Embryophyte View MSA
123428184 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain