Gene : Cagra.1695s0005 C. grandiflora v1.1
Defline:  (1 of 1) 2.8.4.3 - tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase / tRNA-i6A37 methylthiotransferase Genomic Order:  5
Name:  ? Cagra.1695s0005 Secondary Identifier:  ? PAC:28908502
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1695s0005 0.5kb upstream 0.5kb upstream 3302 true Scaffold1695: 32390-35691 Capsella grandiflora
Cagra.1695s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold1695: 35192-35691 Capsella grandiflora
Cagra.1695s0005 0.5kb downstream 0.5kb downstream 3302 true Scaffold1695: 31890-35191 Capsella grandiflora
Cagra.1695s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold1695: 31890-32389 Capsella grandiflora
Cagra.1695s0005 1.0kb upstream 1.0kb upstream 3802 true Scaffold1695: 32390-36191 Capsella grandiflora
Cagra.1695s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold1695: 35192-36191 Capsella grandiflora
Cagra.1695s0005 1.0kb downstream 1.0kb downstream 3802 true Scaffold1695: 31390-35191 Capsella grandiflora
Cagra.1695s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold1695: 31390-32389 Capsella grandiflora
Cagra.1695s0005 2.0kb upstream 2.0kb upstream 4802 true Scaffold1695: 32390-37191 Capsella grandiflora
Cagra.1695s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold1695: 35192-37191 Capsella grandiflora
Cagra.1695s0005 2.0kb downstream 2.0kb downstream 4802 true Scaffold1695: 30390-35191 Capsella grandiflora
Cagra.1695s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold1695: 30390-32389 Capsella grandiflora
Cagra.1695s0005 5.0kb upstream 5.0kb upstream 7802 true Scaffold1695: 32390-40191 Capsella grandiflora
Cagra.1695s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold1695: 35192-40191 Capsella grandiflora
Cagra.1695s0005 5.0kb downstream 5.0kb downstream 7802 true Scaffold1695: 27390-35191 Capsella grandiflora
Cagra.1695s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold1695: 27390-32389 Capsella grandiflora
Cagra.1695s0005 10.0kb upstream 10.0kb upstream 12802 true Scaffold1695: 32390-45191 Capsella grandiflora
Cagra.1695s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold1695: 35192-45191 Capsella grandiflora
Cagra.1695s0005 10.0kb downstream 10.0kb downstream 12802 true Scaffold1695: 22390-35191 Capsella grandiflora
Cagra.1695s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold1695: 22390-32389 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375660 5261 Brassicaceae View MSA
123832653 5264 Brassicales-Malvales View MSA
124344952 5266 SBM View MSA
124240811 5268 Malvidae View MSA
124062354 5270 Rosid View MSA
123737410 5271 Pentapetalae View MSA
122792758 5272 Eudicot View MSA
122047649 5273 Angiosperm View MSA
121350864 5274 Embryophyte View MSA
123427541 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain