Gene : Cagra.1696s0004 C. grandiflora v1.1
Defline:  (1 of 2) PTHR13468:SF1 - PROTEIN DEK Genomic Order:  4
Name:  ? Cagra.1696s0004 Secondary Identifier:  ? PAC:28916095
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1696s0004 0.5kb upstream 0.5kb upstream 5435 true Scaffold1696: 12733-18167 Capsella grandiflora
Cagra.1696s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold1696: 17668-18167 Capsella grandiflora
Cagra.1696s0004 0.5kb downstream 0.5kb downstream 5435 true Scaffold1696: 12233-17667 Capsella grandiflora
Cagra.1696s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold1696: 12233-12732 Capsella grandiflora
Cagra.1696s0004 1.0kb upstream 1.0kb upstream 5935 true Scaffold1696: 12733-18667 Capsella grandiflora
Cagra.1696s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold1696: 17668-18667 Capsella grandiflora
Cagra.1696s0004 1.0kb downstream 1.0kb downstream 5935 true Scaffold1696: 11733-17667 Capsella grandiflora
Cagra.1696s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold1696: 11733-12732 Capsella grandiflora
Cagra.1696s0004 2.0kb upstream 2.0kb upstream 6935 true Scaffold1696: 12733-19667 Capsella grandiflora
Cagra.1696s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold1696: 17668-19667 Capsella grandiflora
Cagra.1696s0004 2.0kb downstream 2.0kb downstream 6935 true Scaffold1696: 10733-17667 Capsella grandiflora
Cagra.1696s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold1696: 10733-12732 Capsella grandiflora
Cagra.1696s0004 5.0kb upstream 5.0kb upstream 9935 true Scaffold1696: 12733-22667 Capsella grandiflora
Cagra.1696s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold1696: 17668-22667 Capsella grandiflora
Cagra.1696s0004 5.0kb downstream 5.0kb downstream 9935 true Scaffold1696: 7733-17667 Capsella grandiflora
Cagra.1696s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold1696: 7733-12732 Capsella grandiflora
Cagra.1696s0004 10.0kb upstream 10.0kb upstream 14935 true Scaffold1696: 12733-27667 Capsella grandiflora
Cagra.1696s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold1696: 17668-27667 Capsella grandiflora
Cagra.1696s0004 10.0kb downstream 10.0kb downstream 14935 true Scaffold1696: 2733-17667 Capsella grandiflora
Cagra.1696s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold1696: 2733-12732 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375735 5261 Brassicaceae View MSA
123839695 5264 Brassicales-Malvales View MSA
124350029 5266 SBM View MSA
124251106 5268 Malvidae View MSA
124072894 5270 Rosid View MSA
123748946 5271 Pentapetalae View MSA
122791456 5272 Eudicot View MSA
122042773 5273 Angiosperm View MSA
121346519 5274 Embryophyte View MSA
123426401 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain