Gene : Cagra.1696s0028 C. grandiflora v1.1
Defline:  (1 of 1) 2.7.7.22 - Mannose-1-phosphate guanylyltransferase (GDP) / GDP-mannose pyrophosphorylase Genomic Order:  28
Name:  ? Cagra.1696s0028 Secondary Identifier:  ? PAC:28916106
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-882 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1696s0028 0.5kb upstream 0.5kb upstream 2984 true Scaffold1696: 89812-92795 Capsella grandiflora
Cagra.1696s0028 0.5kb upstream 0.5kb upstream 500 false Scaffold1696: 92296-92795 Capsella grandiflora
Cagra.1696s0028 0.5kb downstream 0.5kb downstream 2984 true Scaffold1696: 89312-92295 Capsella grandiflora
Cagra.1696s0028 0.5kb downstream 0.5kb downstream 500 false Scaffold1696: 89312-89811 Capsella grandiflora
Cagra.1696s0028 1.0kb upstream 1.0kb upstream 3484 true Scaffold1696: 89812-93295 Capsella grandiflora
Cagra.1696s0028 1.0kb upstream 1.0kb upstream 1000 false Scaffold1696: 92296-93295 Capsella grandiflora
Cagra.1696s0028 1.0kb downstream 1.0kb downstream 3484 true Scaffold1696: 88812-92295 Capsella grandiflora
Cagra.1696s0028 1.0kb downstream 1.0kb downstream 1000 false Scaffold1696: 88812-89811 Capsella grandiflora
Cagra.1696s0028 2.0kb upstream 2.0kb upstream 4484 true Scaffold1696: 89812-94295 Capsella grandiflora
Cagra.1696s0028 2.0kb upstream 2.0kb upstream 2000 false Scaffold1696: 92296-94295 Capsella grandiflora
Cagra.1696s0028 2.0kb downstream 2.0kb downstream 4484 true Scaffold1696: 87812-92295 Capsella grandiflora
Cagra.1696s0028 2.0kb downstream 2.0kb downstream 2000 false Scaffold1696: 87812-89811 Capsella grandiflora
Cagra.1696s0028 5.0kb upstream 5.0kb upstream 7484 true Scaffold1696: 89812-97295 Capsella grandiflora
Cagra.1696s0028 5.0kb upstream 5.0kb upstream 5000 false Scaffold1696: 92296-97295 Capsella grandiflora
Cagra.1696s0028 5.0kb downstream 5.0kb downstream 7484 true Scaffold1696: 84812-92295 Capsella grandiflora
Cagra.1696s0028 5.0kb downstream 5.0kb downstream 5000 false Scaffold1696: 84812-89811 Capsella grandiflora
Cagra.1696s0028 10.0kb upstream 10.0kb upstream 12484 true Scaffold1696: 89812-102295 Capsella grandiflora
Cagra.1696s0028 10.0kb upstream 10.0kb upstream 10000 false Scaffold1696: 92296-102295 Capsella grandiflora
Cagra.1696s0028 10.0kb downstream 10.0kb downstream 12484 true Scaffold1696: 79812-92295 Capsella grandiflora
Cagra.1696s0028 10.0kb downstream 10.0kb downstream 10000 false Scaffold1696: 79812-89811 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377404 5261 Brassicaceae View MSA
123835085 5264 Brassicales-Malvales View MSA
124347408 5266 SBM View MSA
124245480 5268 Malvidae View MSA
124071871 5270 Rosid View MSA
123751256 5271 Pentapetalae View MSA
122793442 5272 Eudicot View MSA
122044489 5273 Angiosperm View MSA
121349330 5274 Embryophyte View MSA
123424251 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain