Gene : Cagra.1696s0021 C. grandiflora v1.1
Defline:  (1 of 2) PTHR21237:SF23 - GRPE PROTEIN HOMOLOG, MITOCHONDRIAL Genomic Order:  21
Name:  ? Cagra.1696s0021 Secondary Identifier:  ? PAC:28916071
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1696s0021 0.5kb upstream 0.5kb upstream 2930 true Scaffold1696: 73371-76300 Capsella grandiflora
Cagra.1696s0021 0.5kb upstream 0.5kb upstream 500 false Scaffold1696: 75801-76300 Capsella grandiflora
Cagra.1696s0021 0.5kb downstream 0.5kb downstream 2930 true Scaffold1696: 72871-75800 Capsella grandiflora
Cagra.1696s0021 0.5kb downstream 0.5kb downstream 500 false Scaffold1696: 72871-73370 Capsella grandiflora
Cagra.1696s0021 1.0kb upstream 1.0kb upstream 3430 true Scaffold1696: 73371-76800 Capsella grandiflora
Cagra.1696s0021 1.0kb upstream 1.0kb upstream 1000 false Scaffold1696: 75801-76800 Capsella grandiflora
Cagra.1696s0021 1.0kb downstream 1.0kb downstream 3430 true Scaffold1696: 72371-75800 Capsella grandiflora
Cagra.1696s0021 1.0kb downstream 1.0kb downstream 1000 false Scaffold1696: 72371-73370 Capsella grandiflora
Cagra.1696s0021 2.0kb upstream 2.0kb upstream 4430 true Scaffold1696: 73371-77800 Capsella grandiflora
Cagra.1696s0021 2.0kb upstream 2.0kb upstream 2000 false Scaffold1696: 75801-77800 Capsella grandiflora
Cagra.1696s0021 2.0kb downstream 2.0kb downstream 4430 true Scaffold1696: 71371-75800 Capsella grandiflora
Cagra.1696s0021 2.0kb downstream 2.0kb downstream 2000 false Scaffold1696: 71371-73370 Capsella grandiflora
Cagra.1696s0021 5.0kb upstream 5.0kb upstream 7430 true Scaffold1696: 73371-80800 Capsella grandiflora
Cagra.1696s0021 5.0kb upstream 5.0kb upstream 5000 false Scaffold1696: 75801-80800 Capsella grandiflora
Cagra.1696s0021 5.0kb downstream 5.0kb downstream 7430 true Scaffold1696: 68371-75800 Capsella grandiflora
Cagra.1696s0021 5.0kb downstream 5.0kb downstream 5000 false Scaffold1696: 68371-73370 Capsella grandiflora
Cagra.1696s0021 10.0kb upstream 10.0kb upstream 12430 true Scaffold1696: 73371-85800 Capsella grandiflora
Cagra.1696s0021 10.0kb upstream 10.0kb upstream 10000 false Scaffold1696: 75801-85800 Capsella grandiflora
Cagra.1696s0021 10.0kb downstream 10.0kb downstream 12430 true Scaffold1696: 63371-75800 Capsella grandiflora
Cagra.1696s0021 10.0kb downstream 10.0kb downstream 10000 false Scaffold1696: 63371-73370 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371223 5261 Brassicaceae View MSA
123838758 5264 Brassicales-Malvales View MSA
124337969 5266 SBM View MSA
124253612 5268 Malvidae View MSA
124069048 5270 Rosid View MSA
123741458 5271 Pentapetalae View MSA
122792349 5272 Eudicot View MSA
122044347 5273 Angiosperm View MSA
121345986 5274 Embryophyte View MSA
123427154 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain