Gene : Cagra.2117s0027 C. grandiflora v1.1
Defline:  (1 of 1) PTHR16056:SF2 - TESTIS-EXPRESSED SEQUENCE 10 PROTEIN HOMOLOG Genomic Order:  27
Name:  ? Cagra.2117s0027 Secondary Identifier:  ? PAC:28905579
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2117s0027 0.5kb upstream 0.5kb upstream 6147 true Scaffold2117: 97379-103525 Capsella grandiflora
Cagra.2117s0027 0.5kb upstream 0.5kb upstream 500 false Scaffold2117: 103026-103525 Capsella grandiflora
Cagra.2117s0027 0.5kb downstream 0.5kb downstream 6147 true Scaffold2117: 96879-103025 Capsella grandiflora
Cagra.2117s0027 0.5kb downstream 0.5kb downstream 500 false Scaffold2117: 96879-97378 Capsella grandiflora
Cagra.2117s0027 1.0kb upstream 1.0kb upstream 6647 true Scaffold2117: 97379-104025 Capsella grandiflora
Cagra.2117s0027 1.0kb upstream 1.0kb upstream 1000 false Scaffold2117: 103026-104025 Capsella grandiflora
Cagra.2117s0027 1.0kb downstream 1.0kb downstream 6647 true Scaffold2117: 96379-103025 Capsella grandiflora
Cagra.2117s0027 1.0kb downstream 1.0kb downstream 1000 false Scaffold2117: 96379-97378 Capsella grandiflora
Cagra.2117s0027 2.0kb upstream 2.0kb upstream 7647 true Scaffold2117: 97379-105025 Capsella grandiflora
Cagra.2117s0027 2.0kb upstream 2.0kb upstream 2000 false Scaffold2117: 103026-105025 Capsella grandiflora
Cagra.2117s0027 2.0kb downstream 2.0kb downstream 7647 true Scaffold2117: 95379-103025 Capsella grandiflora
Cagra.2117s0027 2.0kb downstream 2.0kb downstream 2000 false Scaffold2117: 95379-97378 Capsella grandiflora
Cagra.2117s0027 5.0kb upstream 5.0kb upstream 10647 true Scaffold2117: 97379-108025 Capsella grandiflora
Cagra.2117s0027 5.0kb upstream 5.0kb upstream 5000 false Scaffold2117: 103026-108025 Capsella grandiflora
Cagra.2117s0027 5.0kb downstream 5.0kb downstream 10647 true Scaffold2117: 92379-103025 Capsella grandiflora
Cagra.2117s0027 5.0kb downstream 5.0kb downstream 5000 false Scaffold2117: 92379-97378 Capsella grandiflora
Cagra.2117s0027 10.0kb upstream 10.0kb upstream 15647 true Scaffold2117: 97379-113025 Capsella grandiflora
Cagra.2117s0027 10.0kb upstream 10.0kb upstream 10000 false Scaffold2117: 103026-113025 Capsella grandiflora
Cagra.2117s0027 10.0kb downstream 10.0kb downstream 15647 true Scaffold2117: 87379-103025 Capsella grandiflora
Cagra.2117s0027 10.0kb downstream 10.0kb downstream 10000 false Scaffold2117: 87379-97378 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029601 5273 Angiosperm View MSA
122372867 5261 Brassicaceae View MSA
123830956 5264 Brassicales-Malvales View MSA
124346266 5266 SBM View MSA
124245108 5268 Malvidae View MSA
124068256 5270 Rosid View MSA
123740186 5271 Pentapetalae View MSA
122789427 5272 Eudicot View MSA
121346343 5274 Embryophyte View MSA
123424675 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain