Gene : Cagra.2117s0054 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31529:SF6 - LOB DOMAIN-CONTAINING PROTEIN 33 Genomic Order:  54
Name:  ? Cagra.2117s0054 Secondary Identifier:  ? PAC:28905598
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2117s0054 0.5kb upstream 0.5kb upstream 1168 true Scaffold2117: 207384-208551 Capsella grandiflora
Cagra.2117s0054 0.5kb upstream 0.5kb upstream 500 false Scaffold2117: 207384-207883 Capsella grandiflora
Cagra.2117s0054 0.5kb downstream 0.5kb downstream 1168 true Scaffold2117: 207884-209051 Capsella grandiflora
Cagra.2117s0054 0.5kb downstream 0.5kb downstream 500 false Scaffold2117: 208552-209051 Capsella grandiflora
Cagra.2117s0054 1.0kb upstream 1.0kb upstream 1668 true Scaffold2117: 206884-208551 Capsella grandiflora
Cagra.2117s0054 1.0kb upstream 1.0kb upstream 1000 false Scaffold2117: 206884-207883 Capsella grandiflora
Cagra.2117s0054 1.0kb downstream 1.0kb downstream 1668 true Scaffold2117: 207884-209551 Capsella grandiflora
Cagra.2117s0054 1.0kb downstream 1.0kb downstream 1000 false Scaffold2117: 208552-209551 Capsella grandiflora
Cagra.2117s0054 2.0kb upstream 2.0kb upstream 2668 true Scaffold2117: 205884-208551 Capsella grandiflora
Cagra.2117s0054 2.0kb upstream 2.0kb upstream 2000 false Scaffold2117: 205884-207883 Capsella grandiflora
Cagra.2117s0054 2.0kb downstream 2.0kb downstream 2668 true Scaffold2117: 207884-210551 Capsella grandiflora
Cagra.2117s0054 2.0kb downstream 2.0kb downstream 2000 false Scaffold2117: 208552-210551 Capsella grandiflora
Cagra.2117s0054 5.0kb upstream 5.0kb upstream 5668 true Scaffold2117: 202884-208551 Capsella grandiflora
Cagra.2117s0054 5.0kb upstream 5.0kb upstream 5000 false Scaffold2117: 202884-207883 Capsella grandiflora
Cagra.2117s0054 5.0kb downstream 5.0kb downstream 5668 true Scaffold2117: 207884-213551 Capsella grandiflora
Cagra.2117s0054 5.0kb downstream 5.0kb downstream 5000 false Scaffold2117: 208552-213551 Capsella grandiflora
Cagra.2117s0054 10.0kb upstream 10.0kb upstream 10668 true Scaffold2117: 197884-208551 Capsella grandiflora
Cagra.2117s0054 10.0kb upstream 10.0kb upstream 10000 false Scaffold2117: 197884-207883 Capsella grandiflora
Cagra.2117s0054 10.0kb downstream 10.0kb downstream 10668 true Scaffold2117: 207884-218551 Capsella grandiflora
Cagra.2117s0054 10.0kb downstream 10.0kb downstream 10000 false Scaffold2117: 208552-218551 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361931 5261 Brassicaceae View MSA
123835536 5264 Brassicales-Malvales View MSA
124347286 5266 SBM View MSA
124244721 5268 Malvidae View MSA
124067335 5270 Rosid View MSA
123752210 5271 Pentapetalae View MSA
122796223 5272 Eudicot View MSA
122048133 5273 Angiosperm View MSA
121350574 5274 Embryophyte View MSA
123381803 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain