Gene : Cagra.2129s0005 C. grandiflora v1.1
Defline:  (1 of 2) PTHR13954 - IRE1-RELATED Genomic Order:  5
Name:  ? Cagra.2129s0005 Secondary Identifier:  ? PAC:28914970
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2129s0005 0.5kb upstream 0.5kb upstream 4030 true Scaffold2129: 20793-24822 Capsella grandiflora
Cagra.2129s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold2129: 20793-21292 Capsella grandiflora
Cagra.2129s0005 0.5kb downstream 0.5kb downstream 4030 true Scaffold2129: 21293-25322 Capsella grandiflora
Cagra.2129s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold2129: 24823-25322 Capsella grandiflora
Cagra.2129s0005 1.0kb upstream 1.0kb upstream 4530 true Scaffold2129: 20293-24822 Capsella grandiflora
Cagra.2129s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold2129: 20293-21292 Capsella grandiflora
Cagra.2129s0005 1.0kb downstream 1.0kb downstream 4530 true Scaffold2129: 21293-25822 Capsella grandiflora
Cagra.2129s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold2129: 24823-25822 Capsella grandiflora
Cagra.2129s0005 2.0kb upstream 2.0kb upstream 5530 true Scaffold2129: 19293-24822 Capsella grandiflora
Cagra.2129s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold2129: 19293-21292 Capsella grandiflora
Cagra.2129s0005 2.0kb downstream 2.0kb downstream 5530 true Scaffold2129: 21293-26822 Capsella grandiflora
Cagra.2129s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold2129: 24823-26822 Capsella grandiflora
Cagra.2129s0005 5.0kb upstream 5.0kb upstream 8530 true Scaffold2129: 16293-24822 Capsella grandiflora
Cagra.2129s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold2129: 16293-21292 Capsella grandiflora
Cagra.2129s0005 5.0kb downstream 5.0kb downstream 8530 true Scaffold2129: 21293-29822 Capsella grandiflora
Cagra.2129s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold2129: 24823-29822 Capsella grandiflora
Cagra.2129s0005 10.0kb upstream 10.0kb upstream 13530 true Scaffold2129: 11293-24822 Capsella grandiflora
Cagra.2129s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold2129: 11293-21292 Capsella grandiflora
Cagra.2129s0005 10.0kb downstream 10.0kb downstream 13530 true Scaffold2129: 21293-34822 Capsella grandiflora
Cagra.2129s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold2129: 24823-34822 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372802 5261 Brassicaceae View MSA
123827975 5264 Brassicales-Malvales View MSA
124345434 5266 SBM View MSA
124250283 5268 Malvidae View MSA
124069221 5270 Rosid View MSA
123736649 5271 Pentapetalae View MSA
122796979 5272 Eudicot View MSA
122047028 5273 Angiosperm View MSA
123429186 5275 Viridiplantae View MSA
121347978 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain