Gene : Cagra.2098s0084 C. grandiflora v1.1
Defline:  (1 of 2) PTHR13856//PTHR13856:SF93 - VHS DOMAIN CONTAINING PROTEIN FAMILY Genomic Order:  84
Name:  ? Cagra.2098s0084 Secondary Identifier:  ? PAC:28919521
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2098s0084 0.5kb upstream 0.5kb upstream 1971 true Scaffold2098: 288443-290413 Capsella grandiflora
Cagra.2098s0084 0.5kb upstream 0.5kb upstream 500 false Scaffold2098: 289914-290413 Capsella grandiflora
Cagra.2098s0084 0.5kb downstream 0.5kb downstream 1971 true Scaffold2098: 287943-289913 Capsella grandiflora
Cagra.2098s0084 0.5kb downstream 0.5kb downstream 500 false Scaffold2098: 287943-288442 Capsella grandiflora
Cagra.2098s0084 1.0kb upstream 1.0kb upstream 2471 true Scaffold2098: 288443-290913 Capsella grandiflora
Cagra.2098s0084 1.0kb upstream 1.0kb upstream 1000 false Scaffold2098: 289914-290913 Capsella grandiflora
Cagra.2098s0084 1.0kb downstream 1.0kb downstream 2471 true Scaffold2098: 287443-289913 Capsella grandiflora
Cagra.2098s0084 1.0kb downstream 1.0kb downstream 1000 false Scaffold2098: 287443-288442 Capsella grandiflora
Cagra.2098s0084 2.0kb upstream 2.0kb upstream 3471 true Scaffold2098: 288443-291913 Capsella grandiflora
Cagra.2098s0084 2.0kb upstream 2.0kb upstream 2000 false Scaffold2098: 289914-291913 Capsella grandiflora
Cagra.2098s0084 2.0kb downstream 2.0kb downstream 3471 true Scaffold2098: 286443-289913 Capsella grandiflora
Cagra.2098s0084 2.0kb downstream 2.0kb downstream 2000 false Scaffold2098: 286443-288442 Capsella grandiflora
Cagra.2098s0084 5.0kb upstream 5.0kb upstream 5455 true Scaffold2098: 288443-293897 Capsella grandiflora
Cagra.2098s0084 5.0kb upstream 5.0kb upstream 3984 false Scaffold2098: 289914-293897 Capsella grandiflora
Cagra.2098s0084 5.0kb downstream 5.0kb downstream 6471 true Scaffold2098: 283443-289913 Capsella grandiflora
Cagra.2098s0084 5.0kb downstream 5.0kb downstream 5000 false Scaffold2098: 283443-288442 Capsella grandiflora
Cagra.2098s0084 10.0kb upstream 10.0kb upstream 5455 true Scaffold2098: 288443-293897 Capsella grandiflora
Cagra.2098s0084 10.0kb upstream 10.0kb upstream 3984 false Scaffold2098: 289914-293897 Capsella grandiflora
Cagra.2098s0084 10.0kb downstream 10.0kb downstream 11471 true Scaffold2098: 278443-289913 Capsella grandiflora
Cagra.2098s0084 10.0kb downstream 10.0kb downstream 10000 false Scaffold2098: 278443-288442 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377105 5261 Brassicaceae View MSA
123801443 5264 Brassicales-Malvales View MSA
124298744 5266 SBM View MSA
124150316 5268 Malvidae View MSA
123875952 5270 Rosid View MSA
123746960 5271 Pentapetalae View MSA
122785601 5272 Eudicot View MSA
122046025 5273 Angiosperm View MSA
121345678 5274 Embryophyte View MSA
123380253 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain