Gene : Cagra.2104s0013 C. grandiflora v1.1
Defline:  (1 of 8) PF05542 - Protein of unknown function (DUF760) (DUF760) Genomic Order:  13
Name:  ? Cagra.2104s0013 Secondary Identifier:  ? PAC:28896262
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2104s0013 0.5kb upstream 0.5kb upstream 2632 true Scaffold2104: 51259-53890 Capsella grandiflora
Cagra.2104s0013 0.5kb upstream 0.5kb upstream 500 false Scaffold2104: 51259-51758 Capsella grandiflora
Cagra.2104s0013 0.5kb downstream 0.5kb downstream 2632 true Scaffold2104: 51759-54390 Capsella grandiflora
Cagra.2104s0013 0.5kb downstream 0.5kb downstream 500 false Scaffold2104: 53891-54390 Capsella grandiflora
Cagra.2104s0013 1.0kb upstream 1.0kb upstream 3132 true Scaffold2104: 50759-53890 Capsella grandiflora
Cagra.2104s0013 1.0kb upstream 1.0kb upstream 1000 false Scaffold2104: 50759-51758 Capsella grandiflora
Cagra.2104s0013 1.0kb downstream 1.0kb downstream 3132 true Scaffold2104: 51759-54890 Capsella grandiflora
Cagra.2104s0013 1.0kb downstream 1.0kb downstream 1000 false Scaffold2104: 53891-54890 Capsella grandiflora
Cagra.2104s0013 2.0kb upstream 2.0kb upstream 4132 true Scaffold2104: 49759-53890 Capsella grandiflora
Cagra.2104s0013 2.0kb upstream 2.0kb upstream 2000 false Scaffold2104: 49759-51758 Capsella grandiflora
Cagra.2104s0013 2.0kb downstream 2.0kb downstream 4132 true Scaffold2104: 51759-55890 Capsella grandiflora
Cagra.2104s0013 2.0kb downstream 2.0kb downstream 2000 false Scaffold2104: 53891-55890 Capsella grandiflora
Cagra.2104s0013 5.0kb upstream 5.0kb upstream 7132 true Scaffold2104: 46759-53890 Capsella grandiflora
Cagra.2104s0013 5.0kb upstream 5.0kb upstream 5000 false Scaffold2104: 46759-51758 Capsella grandiflora
Cagra.2104s0013 5.0kb downstream 5.0kb downstream 7132 true Scaffold2104: 51759-58890 Capsella grandiflora
Cagra.2104s0013 5.0kb downstream 5.0kb downstream 5000 false Scaffold2104: 53891-58890 Capsella grandiflora
Cagra.2104s0013 10.0kb upstream 10.0kb upstream 12132 true Scaffold2104: 41759-53890 Capsella grandiflora
Cagra.2104s0013 10.0kb upstream 10.0kb upstream 10000 false Scaffold2104: 41759-51758 Capsella grandiflora
Cagra.2104s0013 10.0kb downstream 10.0kb downstream 12132 true Scaffold2104: 51759-63890 Capsella grandiflora
Cagra.2104s0013 10.0kb downstream 10.0kb downstream 10000 false Scaffold2104: 53891-63890 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368918 5261 Brassicaceae View MSA
123834173 5264 Brassicales-Malvales View MSA
124340581 5266 SBM View MSA
124237273 5268 Malvidae View MSA
124062669 5270 Rosid View MSA
123739576 5271 Pentapetalae View MSA
122788055 5272 Eudicot View MSA
122047250 5273 Angiosperm View MSA
121350732 5274 Embryophyte View MSA
123426159 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain