Gene : Cagra.2104s0030 C. grandiflora v1.1
Defline:  (1 of 3) PF00122//PF00403//PF12710 - E1-E2 ATPase (E1-E2_ATPase) // Heavy-metal-associated domain (HMA) // haloacid dehalogenase-like hydrolase (HAD) Genomic Order:  30
Name:  ? Cagra.2104s0030 Secondary Identifier:  ? PAC:28896282
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2104s0030 0.5kb upstream 0.5kb upstream 4180 true Scaffold2104: 110559-114738 Capsella grandiflora
Cagra.2104s0030 0.5kb upstream 0.5kb upstream 500 false Scaffold2104: 114239-114738 Capsella grandiflora
Cagra.2104s0030 0.5kb downstream 0.5kb downstream 4180 true Scaffold2104: 110059-114238 Capsella grandiflora
Cagra.2104s0030 0.5kb downstream 0.5kb downstream 500 false Scaffold2104: 110059-110558 Capsella grandiflora
Cagra.2104s0030 1.0kb upstream 1.0kb upstream 4680 true Scaffold2104: 110559-115238 Capsella grandiflora
Cagra.2104s0030 1.0kb upstream 1.0kb upstream 1000 false Scaffold2104: 114239-115238 Capsella grandiflora
Cagra.2104s0030 1.0kb downstream 1.0kb downstream 4680 true Scaffold2104: 109559-114238 Capsella grandiflora
Cagra.2104s0030 1.0kb downstream 1.0kb downstream 1000 false Scaffold2104: 109559-110558 Capsella grandiflora
Cagra.2104s0030 2.0kb upstream 2.0kb upstream 5680 true Scaffold2104: 110559-116238 Capsella grandiflora
Cagra.2104s0030 2.0kb upstream 2.0kb upstream 2000 false Scaffold2104: 114239-116238 Capsella grandiflora
Cagra.2104s0030 2.0kb downstream 2.0kb downstream 5680 true Scaffold2104: 108559-114238 Capsella grandiflora
Cagra.2104s0030 2.0kb downstream 2.0kb downstream 2000 false Scaffold2104: 108559-110558 Capsella grandiflora
Cagra.2104s0030 5.0kb upstream 5.0kb upstream 8680 true Scaffold2104: 110559-119238 Capsella grandiflora
Cagra.2104s0030 5.0kb upstream 5.0kb upstream 5000 false Scaffold2104: 114239-119238 Capsella grandiflora
Cagra.2104s0030 5.0kb downstream 5.0kb downstream 8680 true Scaffold2104: 105559-114238 Capsella grandiflora
Cagra.2104s0030 5.0kb downstream 5.0kb downstream 5000 false Scaffold2104: 105559-110558 Capsella grandiflora
Cagra.2104s0030 10.0kb upstream 10.0kb upstream 13680 true Scaffold2104: 110559-124238 Capsella grandiflora
Cagra.2104s0030 10.0kb upstream 10.0kb upstream 10000 false Scaffold2104: 114239-124238 Capsella grandiflora
Cagra.2104s0030 10.0kb downstream 10.0kb downstream 13680 true Scaffold2104: 100559-114238 Capsella grandiflora
Cagra.2104s0030 10.0kb downstream 10.0kb downstream 10000 false Scaffold2104: 100559-110558 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369279 5261 Brassicaceae View MSA
123832751 5264 Brassicales-Malvales View MSA
124346158 5266 SBM View MSA
124242737 5268 Malvidae View MSA
124069663 5270 Rosid View MSA
123747003 5271 Pentapetalae View MSA
122794490 5272 Eudicot View MSA
122042760 5273 Angiosperm View MSA
121351146 5274 Embryophyte View MSA
123426796 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain