Gene : Cagra.2107s0003 C. grandiflora v1.1
Defline:  (1 of 6) PTHR19432:SF38 - SUCROSE TRANSPORT PROTEIN SUC1-RELATED Genomic Order:  3
Name:  ? Cagra.2107s0003 Secondary Identifier:  ? PAC:28905249
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2107s0003 0.5kb upstream 0.5kb upstream 1995 true Scaffold2107: 14902-16896 Capsella grandiflora
Cagra.2107s0003 0.5kb upstream 0.5kb upstream 335 false Scaffold2107: 16562-16896 Capsella grandiflora
Cagra.2107s0003 0.5kb downstream 0.5kb downstream 2160 true Scaffold2107: 14402-16561 Capsella grandiflora
Cagra.2107s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold2107: 14402-14901 Capsella grandiflora
Cagra.2107s0003 1.0kb upstream 1.0kb upstream 1995 true Scaffold2107: 14902-16896 Capsella grandiflora
Cagra.2107s0003 1.0kb upstream 1.0kb upstream 335 false Scaffold2107: 16562-16896 Capsella grandiflora
Cagra.2107s0003 1.0kb downstream 1.0kb downstream 2660 true Scaffold2107: 13902-16561 Capsella grandiflora
Cagra.2107s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold2107: 13902-14901 Capsella grandiflora
Cagra.2107s0003 2.0kb upstream 2.0kb upstream 1995 true Scaffold2107: 14902-16896 Capsella grandiflora
Cagra.2107s0003 2.0kb upstream 2.0kb upstream 335 false Scaffold2107: 16562-16896 Capsella grandiflora
Cagra.2107s0003 2.0kb downstream 2.0kb downstream 3660 true Scaffold2107: 12902-16561 Capsella grandiflora
Cagra.2107s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold2107: 12902-14901 Capsella grandiflora
Cagra.2107s0003 5.0kb upstream 5.0kb upstream 1995 true Scaffold2107: 14902-16896 Capsella grandiflora
Cagra.2107s0003 5.0kb upstream 5.0kb upstream 335 false Scaffold2107: 16562-16896 Capsella grandiflora
Cagra.2107s0003 5.0kb downstream 5.0kb downstream 6660 true Scaffold2107: 9902-16561 Capsella grandiflora
Cagra.2107s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold2107: 9902-14901 Capsella grandiflora
Cagra.2107s0003 10.0kb upstream 10.0kb upstream 1995 true Scaffold2107: 14902-16896 Capsella grandiflora
Cagra.2107s0003 10.0kb upstream 10.0kb upstream 335 false Scaffold2107: 16562-16896 Capsella grandiflora
Cagra.2107s0003 10.0kb downstream 10.0kb downstream 11660 true Scaffold2107: 4902-16561 Capsella grandiflora
Cagra.2107s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold2107: 4902-14901 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364176 5261 Brassicaceae View MSA
123798701 5264 Brassicales-Malvales View MSA
124296305 5266 SBM View MSA
124255160 5268 Malvidae View MSA
124038005 5270 Rosid View MSA
123610602 5271 Pentapetalae View MSA
122645208 5272 Eudicot View MSA
122050885 5273 Angiosperm View MSA
121349366 5274 Embryophyte View MSA
123381287 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain