Gene : Cagra.2117s0003 C. grandiflora v1.1
Defline:  (1 of 2) PTHR24006:SF445 - UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 15 Genomic Order:  3
Name:  ? Cagra.2117s0003 Secondary Identifier:  ? PAC:28905591
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2117s0003 0.5kb upstream 0.5kb upstream 9405 true Scaffold2117: 11777-21181 Capsella grandiflora
Cagra.2117s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold2117: 11777-12276 Capsella grandiflora
Cagra.2117s0003 0.5kb downstream 0.5kb downstream 9405 true Scaffold2117: 12277-21681 Capsella grandiflora
Cagra.2117s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold2117: 21182-21681 Capsella grandiflora
Cagra.2117s0003 1.0kb upstream 1.0kb upstream 9905 true Scaffold2117: 11277-21181 Capsella grandiflora
Cagra.2117s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold2117: 11277-12276 Capsella grandiflora
Cagra.2117s0003 1.0kb downstream 1.0kb downstream 9905 true Scaffold2117: 12277-22181 Capsella grandiflora
Cagra.2117s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold2117: 21182-22181 Capsella grandiflora
Cagra.2117s0003 2.0kb upstream 2.0kb upstream 10905 true Scaffold2117: 10277-21181 Capsella grandiflora
Cagra.2117s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold2117: 10277-12276 Capsella grandiflora
Cagra.2117s0003 2.0kb downstream 2.0kb downstream 10905 true Scaffold2117: 12277-23181 Capsella grandiflora
Cagra.2117s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold2117: 21182-23181 Capsella grandiflora
Cagra.2117s0003 5.0kb upstream 5.0kb upstream 13905 true Scaffold2117: 7277-21181 Capsella grandiflora
Cagra.2117s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold2117: 7277-12276 Capsella grandiflora
Cagra.2117s0003 5.0kb downstream 5.0kb downstream 13905 true Scaffold2117: 12277-26181 Capsella grandiflora
Cagra.2117s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold2117: 21182-26181 Capsella grandiflora
Cagra.2117s0003 10.0kb upstream 10.0kb upstream 18905 true Scaffold2117: 2277-21181 Capsella grandiflora
Cagra.2117s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold2117: 2277-12276 Capsella grandiflora
Cagra.2117s0003 10.0kb downstream 10.0kb downstream 18905 true Scaffold2117: 12277-31181 Capsella grandiflora
Cagra.2117s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold2117: 21182-31181 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370674 5261 Brassicaceae View MSA
123841260 5264 Brassicales-Malvales View MSA
124343034 5266 SBM View MSA
124243207 5268 Malvidae View MSA
124072091 5270 Rosid View MSA
123746914 5271 Pentapetalae View MSA
122788764 5272 Eudicot View MSA
122042201 5273 Angiosperm View MSA
121346231 5274 Embryophyte View MSA
123427549 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain