Gene : Cagra.2117s0007 C. grandiflora v1.1
Defline:  (1 of 1) PTHR23024:SF102 - CARBOXYLESTERASE 15-RELATED Genomic Order:  7
Name:  ? Cagra.2117s0007 Secondary Identifier:  ? PAC:28905619
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-6303 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2117s0007 0.5kb upstream 0.5kb upstream 3883 true Scaffold2117: 30884-34766 Capsella grandiflora
Cagra.2117s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold2117: 30884-31383 Capsella grandiflora
Cagra.2117s0007 0.5kb downstream 0.5kb downstream 3883 true Scaffold2117: 31384-35266 Capsella grandiflora
Cagra.2117s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold2117: 34767-35266 Capsella grandiflora
Cagra.2117s0007 1.0kb upstream 1.0kb upstream 4383 true Scaffold2117: 30384-34766 Capsella grandiflora
Cagra.2117s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold2117: 30384-31383 Capsella grandiflora
Cagra.2117s0007 1.0kb downstream 1.0kb downstream 4383 true Scaffold2117: 31384-35766 Capsella grandiflora
Cagra.2117s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold2117: 34767-35766 Capsella grandiflora
Cagra.2117s0007 2.0kb upstream 2.0kb upstream 5383 true Scaffold2117: 29384-34766 Capsella grandiflora
Cagra.2117s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold2117: 29384-31383 Capsella grandiflora
Cagra.2117s0007 2.0kb downstream 2.0kb downstream 5383 true Scaffold2117: 31384-36766 Capsella grandiflora
Cagra.2117s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold2117: 34767-36766 Capsella grandiflora
Cagra.2117s0007 5.0kb upstream 5.0kb upstream 8383 true Scaffold2117: 26384-34766 Capsella grandiflora
Cagra.2117s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold2117: 26384-31383 Capsella grandiflora
Cagra.2117s0007 5.0kb downstream 5.0kb downstream 8383 true Scaffold2117: 31384-39766 Capsella grandiflora
Cagra.2117s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold2117: 34767-39766 Capsella grandiflora
Cagra.2117s0007 10.0kb upstream 10.0kb upstream 13383 true Scaffold2117: 21384-34766 Capsella grandiflora
Cagra.2117s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold2117: 21384-31383 Capsella grandiflora
Cagra.2117s0007 10.0kb downstream 10.0kb downstream 13383 true Scaffold2117: 31384-44766 Capsella grandiflora
Cagra.2117s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold2117: 34767-44766 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122333074 5261 Brassicaceae Singleton cluster - no MSA
123837932 5264 Brassicales-Malvales View MSA
124346718 5266 SBM View MSA
124238145 5268 Malvidae View MSA
124067556 5270 Rosid View MSA
123751656 5271 Pentapetalae View MSA
122793188 5272 Eudicot View MSA
122047300 5273 Angiosperm View MSA
123428915 5275 Viridiplantae View MSA
121350136 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain