Gene : Cagra.2098s0005 C. grandiflora v1.1
Defline:  (1 of 69) PF02519 - Auxin responsive protein (Auxin_inducible) Genomic Order:  5
Name:  ? Cagra.2098s0005 Secondary Identifier:  ? PAC:28919550
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2098s0005 0.5kb upstream 0.5kb upstream 1067 true Scaffold2098: 8906-9972 Capsella grandiflora
Cagra.2098s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold2098: 8906-9405 Capsella grandiflora
Cagra.2098s0005 0.5kb downstream 0.5kb downstream 1067 true Scaffold2098: 9406-10472 Capsella grandiflora
Cagra.2098s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold2098: 9973-10472 Capsella grandiflora
Cagra.2098s0005 1.0kb upstream 1.0kb upstream 1567 true Scaffold2098: 8406-9972 Capsella grandiflora
Cagra.2098s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold2098: 8406-9405 Capsella grandiflora
Cagra.2098s0005 1.0kb downstream 1.0kb downstream 1567 true Scaffold2098: 9406-10972 Capsella grandiflora
Cagra.2098s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold2098: 9973-10972 Capsella grandiflora
Cagra.2098s0005 2.0kb upstream 2.0kb upstream 2567 true Scaffold2098: 7406-9972 Capsella grandiflora
Cagra.2098s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold2098: 7406-9405 Capsella grandiflora
Cagra.2098s0005 2.0kb downstream 2.0kb downstream 2567 true Scaffold2098: 9406-11972 Capsella grandiflora
Cagra.2098s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold2098: 9973-11972 Capsella grandiflora
Cagra.2098s0005 5.0kb upstream 5.0kb upstream 5567 true Scaffold2098: 4406-9972 Capsella grandiflora
Cagra.2098s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold2098: 4406-9405 Capsella grandiflora
Cagra.2098s0005 5.0kb downstream 5.0kb downstream 5567 true Scaffold2098: 9406-14972 Capsella grandiflora
Cagra.2098s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold2098: 9973-14972 Capsella grandiflora
Cagra.2098s0005 10.0kb upstream 10.0kb upstream 9972 true Scaffold2098: 1-9972 Capsella grandiflora
Cagra.2098s0005 10.0kb upstream 10.0kb upstream 9405 false Scaffold2098: 1-9405 Capsella grandiflora
Cagra.2098s0005 10.0kb downstream 10.0kb downstream 10567 true Scaffold2098: 9406-19972 Capsella grandiflora
Cagra.2098s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold2098: 9973-19972 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381363 5261 Brassicaceae View MSA
123803203 5264 Brassicales-Malvales View MSA
124300329 5266 SBM View MSA
124151533 5268 Malvidae View MSA
123876945 5270 Rosid View MSA
123753786 5271 Pentapetalae View MSA
122797448 5272 Eudicot View MSA
122051602 5273 Angiosperm View MSA
121351344 5274 Embryophyte View MSA
123382129 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain