Gene : Cagra.2098s0025 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10314:SF90 - S-SULFOCYSTEINE SYNTHASE, CHLOROPLASTIC-RELATED Genomic Order:  25
Name:  ? Cagra.2098s0025 Secondary Identifier:  ? PAC:28919574
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora CYSTSYN-PWY Capsella grandiflora pathologic  
Cgrandiflora PWY-6936 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2098s0025 0.5kb upstream 0.5kb upstream 2981 true Scaffold2098: 94863-97843 Capsella grandiflora
Cagra.2098s0025 0.5kb upstream 0.5kb upstream 500 false Scaffold2098: 94863-95362 Capsella grandiflora
Cagra.2098s0025 0.5kb downstream 0.5kb downstream 2981 true Scaffold2098: 95363-98343 Capsella grandiflora
Cagra.2098s0025 0.5kb downstream 0.5kb downstream 500 false Scaffold2098: 97844-98343 Capsella grandiflora
Cagra.2098s0025 1.0kb upstream 1.0kb upstream 3481 true Scaffold2098: 94363-97843 Capsella grandiflora
Cagra.2098s0025 1.0kb upstream 1.0kb upstream 1000 false Scaffold2098: 94363-95362 Capsella grandiflora
Cagra.2098s0025 1.0kb downstream 1.0kb downstream 3481 true Scaffold2098: 95363-98843 Capsella grandiflora
Cagra.2098s0025 1.0kb downstream 1.0kb downstream 1000 false Scaffold2098: 97844-98843 Capsella grandiflora
Cagra.2098s0025 2.0kb upstream 2.0kb upstream 4481 true Scaffold2098: 93363-97843 Capsella grandiflora
Cagra.2098s0025 2.0kb upstream 2.0kb upstream 2000 false Scaffold2098: 93363-95362 Capsella grandiflora
Cagra.2098s0025 2.0kb downstream 2.0kb downstream 4481 true Scaffold2098: 95363-99843 Capsella grandiflora
Cagra.2098s0025 2.0kb downstream 2.0kb downstream 2000 false Scaffold2098: 97844-99843 Capsella grandiflora
Cagra.2098s0025 5.0kb upstream 5.0kb upstream 7481 true Scaffold2098: 90363-97843 Capsella grandiflora
Cagra.2098s0025 5.0kb upstream 5.0kb upstream 5000 false Scaffold2098: 90363-95362 Capsella grandiflora
Cagra.2098s0025 5.0kb downstream 5.0kb downstream 7481 true Scaffold2098: 95363-102843 Capsella grandiflora
Cagra.2098s0025 5.0kb downstream 5.0kb downstream 5000 false Scaffold2098: 97844-102843 Capsella grandiflora
Cagra.2098s0025 10.0kb upstream 10.0kb upstream 12481 true Scaffold2098: 85363-97843 Capsella grandiflora
Cagra.2098s0025 10.0kb upstream 10.0kb upstream 10000 false Scaffold2098: 85363-95362 Capsella grandiflora
Cagra.2098s0025 10.0kb downstream 10.0kb downstream 12481 true Scaffold2098: 95363-107843 Capsella grandiflora
Cagra.2098s0025 10.0kb downstream 10.0kb downstream 10000 false Scaffold2098: 97844-107843 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368867 5261 Brassicaceae View MSA
123829970 5264 Brassicales-Malvales View MSA
124341631 5266 SBM View MSA
124240411 5268 Malvidae View MSA
124067965 5270 Rosid View MSA
123741617 5271 Pentapetalae View MSA
122788921 5272 Eudicot View MSA
122042312 5273 Angiosperm View MSA
121350970 5274 Embryophyte View MSA
123424805 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain