Gene : Cagra.2098s0033 C. grandiflora v1.1
Defline:  (1 of 4) PF16709 - Fused Ig-PH domain of plant-specific actin-binding protein (SCAB-IgPH) Genomic Order:  33
Name:  ? Cagra.2098s0033 Secondary Identifier:  ? PAC:28919526
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2098s0033 0.5kb upstream 0.5kb upstream 4201 true Scaffold2098: 121887-126087 Capsella grandiflora
Cagra.2098s0033 0.5kb upstream 0.5kb upstream 500 false Scaffold2098: 121887-122386 Capsella grandiflora
Cagra.2098s0033 0.5kb downstream 0.5kb downstream 4201 true Scaffold2098: 122387-126587 Capsella grandiflora
Cagra.2098s0033 0.5kb downstream 0.5kb downstream 500 false Scaffold2098: 126088-126587 Capsella grandiflora
Cagra.2098s0033 1.0kb upstream 1.0kb upstream 4701 true Scaffold2098: 121387-126087 Capsella grandiflora
Cagra.2098s0033 1.0kb upstream 1.0kb upstream 1000 false Scaffold2098: 121387-122386 Capsella grandiflora
Cagra.2098s0033 1.0kb downstream 1.0kb downstream 4701 true Scaffold2098: 122387-127087 Capsella grandiflora
Cagra.2098s0033 1.0kb downstream 1.0kb downstream 1000 false Scaffold2098: 126088-127087 Capsella grandiflora
Cagra.2098s0033 2.0kb upstream 2.0kb upstream 5701 true Scaffold2098: 120387-126087 Capsella grandiflora
Cagra.2098s0033 2.0kb upstream 2.0kb upstream 2000 false Scaffold2098: 120387-122386 Capsella grandiflora
Cagra.2098s0033 2.0kb downstream 2.0kb downstream 5701 true Scaffold2098: 122387-128087 Capsella grandiflora
Cagra.2098s0033 2.0kb downstream 2.0kb downstream 2000 false Scaffold2098: 126088-128087 Capsella grandiflora
Cagra.2098s0033 5.0kb upstream 5.0kb upstream 8701 true Scaffold2098: 117387-126087 Capsella grandiflora
Cagra.2098s0033 5.0kb upstream 5.0kb upstream 5000 false Scaffold2098: 117387-122386 Capsella grandiflora
Cagra.2098s0033 5.0kb downstream 5.0kb downstream 8701 true Scaffold2098: 122387-131087 Capsella grandiflora
Cagra.2098s0033 5.0kb downstream 5.0kb downstream 5000 false Scaffold2098: 126088-131087 Capsella grandiflora
Cagra.2098s0033 10.0kb upstream 10.0kb upstream 13701 true Scaffold2098: 112387-126087 Capsella grandiflora
Cagra.2098s0033 10.0kb upstream 10.0kb upstream 10000 false Scaffold2098: 112387-122386 Capsella grandiflora
Cagra.2098s0033 10.0kb downstream 10.0kb downstream 13701 true Scaffold2098: 122387-136087 Capsella grandiflora
Cagra.2098s0033 10.0kb downstream 10.0kb downstream 10000 false Scaffold2098: 126088-136087 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369669 5261 Brassicaceae View MSA
123833746 5264 Brassicales-Malvales View MSA
124321894 5266 SBM View MSA
124241779 5268 Malvidae View MSA
124074724 5270 Rosid View MSA
123742844 5271 Pentapetalae View MSA
122770408 5272 Eudicot View MSA
122044281 5273 Angiosperm View MSA
121310265 5274 Embryophyte View MSA
123347803 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain