Gene : Cagra.2098s0048 C. grandiflora v1.1
Defline:  (1 of 1) PTHR22939:SF66 - PRO-APOPTOTIC SERINE PROTEASE NMA111 Genomic Order:  48
Name:  ? Cagra.2098s0048 Secondary Identifier:  ? PAC:28919557
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2098s0048 0.5kb upstream 0.5kb upstream 9288 true Scaffold2098: 166388-175675 Capsella grandiflora
Cagra.2098s0048 0.5kb upstream 0.5kb upstream 500 false Scaffold2098: 175176-175675 Capsella grandiflora
Cagra.2098s0048 0.5kb downstream 0.5kb downstream 9288 true Scaffold2098: 165888-175175 Capsella grandiflora
Cagra.2098s0048 0.5kb downstream 0.5kb downstream 500 false Scaffold2098: 165888-166387 Capsella grandiflora
Cagra.2098s0048 1.0kb upstream 1.0kb upstream 9788 true Scaffold2098: 166388-176175 Capsella grandiflora
Cagra.2098s0048 1.0kb upstream 1.0kb upstream 1000 false Scaffold2098: 175176-176175 Capsella grandiflora
Cagra.2098s0048 1.0kb downstream 1.0kb downstream 9788 true Scaffold2098: 165388-175175 Capsella grandiflora
Cagra.2098s0048 1.0kb downstream 1.0kb downstream 1000 false Scaffold2098: 165388-166387 Capsella grandiflora
Cagra.2098s0048 2.0kb upstream 2.0kb upstream 10788 true Scaffold2098: 166388-177175 Capsella grandiflora
Cagra.2098s0048 2.0kb upstream 2.0kb upstream 2000 false Scaffold2098: 175176-177175 Capsella grandiflora
Cagra.2098s0048 2.0kb downstream 2.0kb downstream 10788 true Scaffold2098: 164388-175175 Capsella grandiflora
Cagra.2098s0048 2.0kb downstream 2.0kb downstream 2000 false Scaffold2098: 164388-166387 Capsella grandiflora
Cagra.2098s0048 5.0kb upstream 5.0kb upstream 13788 true Scaffold2098: 166388-180175 Capsella grandiflora
Cagra.2098s0048 5.0kb upstream 5.0kb upstream 5000 false Scaffold2098: 175176-180175 Capsella grandiflora
Cagra.2098s0048 5.0kb downstream 5.0kb downstream 13788 true Scaffold2098: 161388-175175 Capsella grandiflora
Cagra.2098s0048 5.0kb downstream 5.0kb downstream 5000 false Scaffold2098: 161388-166387 Capsella grandiflora
Cagra.2098s0048 10.0kb upstream 10.0kb upstream 18788 true Scaffold2098: 166388-185175 Capsella grandiflora
Cagra.2098s0048 10.0kb upstream 10.0kb upstream 10000 false Scaffold2098: 175176-185175 Capsella grandiflora
Cagra.2098s0048 10.0kb downstream 10.0kb downstream 18788 true Scaffold2098: 156388-175175 Capsella grandiflora
Cagra.2098s0048 10.0kb downstream 10.0kb downstream 10000 false Scaffold2098: 156388-166387 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364694 5261 Brassicaceae View MSA
123834408 5264 Brassicales-Malvales View MSA
124342717 5266 SBM View MSA
124242276 5268 Malvidae View MSA
124066487 5270 Rosid View MSA
123749112 5271 Pentapetalae View MSA
122789271 5272 Eudicot View MSA
122042652 5273 Angiosperm View MSA
121347619 5274 Embryophyte View MSA
123428262 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain