Gene : Cagra.2007s0027 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12320:SF16 - PROTEIN PHOSPHATASE 2C 80-RELATED Genomic Order:  27
Name:  ? Cagra.2007s0027 Secondary Identifier:  ? PAC:28908620
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2007s0027 0.5kb upstream 0.5kb upstream 2688 true Scaffold2007: 100794-103481 Capsella grandiflora
Cagra.2007s0027 0.5kb upstream 0.5kb upstream 500 false Scaffold2007: 100794-101293 Capsella grandiflora
Cagra.2007s0027 0.5kb downstream 0.5kb downstream 2688 true Scaffold2007: 101294-103981 Capsella grandiflora
Cagra.2007s0027 0.5kb downstream 0.5kb downstream 500 false Scaffold2007: 103482-103981 Capsella grandiflora
Cagra.2007s0027 1.0kb upstream 1.0kb upstream 3188 true Scaffold2007: 100294-103481 Capsella grandiflora
Cagra.2007s0027 1.0kb upstream 1.0kb upstream 1000 false Scaffold2007: 100294-101293 Capsella grandiflora
Cagra.2007s0027 1.0kb downstream 1.0kb downstream 3188 true Scaffold2007: 101294-104481 Capsella grandiflora
Cagra.2007s0027 1.0kb downstream 1.0kb downstream 1000 false Scaffold2007: 103482-104481 Capsella grandiflora
Cagra.2007s0027 2.0kb upstream 2.0kb upstream 4188 true Scaffold2007: 99294-103481 Capsella grandiflora
Cagra.2007s0027 2.0kb upstream 2.0kb upstream 2000 false Scaffold2007: 99294-101293 Capsella grandiflora
Cagra.2007s0027 2.0kb downstream 2.0kb downstream 4188 true Scaffold2007: 101294-105481 Capsella grandiflora
Cagra.2007s0027 2.0kb downstream 2.0kb downstream 2000 false Scaffold2007: 103482-105481 Capsella grandiflora
Cagra.2007s0027 5.0kb upstream 5.0kb upstream 7188 true Scaffold2007: 96294-103481 Capsella grandiflora
Cagra.2007s0027 5.0kb upstream 5.0kb upstream 5000 false Scaffold2007: 96294-101293 Capsella grandiflora
Cagra.2007s0027 5.0kb downstream 5.0kb downstream 7188 true Scaffold2007: 101294-108481 Capsella grandiflora
Cagra.2007s0027 5.0kb downstream 5.0kb downstream 5000 false Scaffold2007: 103482-108481 Capsella grandiflora
Cagra.2007s0027 10.0kb upstream 10.0kb upstream 12188 true Scaffold2007: 91294-103481 Capsella grandiflora
Cagra.2007s0027 10.0kb upstream 10.0kb upstream 10000 false Scaffold2007: 91294-101293 Capsella grandiflora
Cagra.2007s0027 10.0kb downstream 10.0kb downstream 12188 true Scaffold2007: 101294-113481 Capsella grandiflora
Cagra.2007s0027 10.0kb downstream 10.0kb downstream 10000 false Scaffold2007: 103482-113481 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367892 5261 Brassicaceae View MSA
123835824 5264 Brassicales-Malvales View MSA
124337822 5266 SBM View MSA
124240045 5268 Malvidae View MSA
124074928 5270 Rosid View MSA
123743389 5271 Pentapetalae View MSA
122796886 5272 Eudicot View MSA
122043108 5273 Angiosperm View MSA
121351334 5274 Embryophyte View MSA
123428574 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain