Gene : Cagra.2007s0046 C. grandiflora v1.1
Defline:  (1 of 4) PTHR11746:SF89 - MAF-LIKE PROTEIN Genomic Order:  46
Name:  ? Cagra.2007s0046 Secondary Identifier:  ? PAC:28908635
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2007s0046 0.5kb upstream 0.5kb upstream 2386 true Scaffold2007: 175352-177737 Capsella grandiflora
Cagra.2007s0046 0.5kb upstream 0.5kb upstream 500 false Scaffold2007: 175352-175851 Capsella grandiflora
Cagra.2007s0046 0.5kb downstream 0.5kb downstream 2386 true Scaffold2007: 175852-178237 Capsella grandiflora
Cagra.2007s0046 0.5kb downstream 0.5kb downstream 500 false Scaffold2007: 177738-178237 Capsella grandiflora
Cagra.2007s0046 1.0kb upstream 1.0kb upstream 2886 true Scaffold2007: 174852-177737 Capsella grandiflora
Cagra.2007s0046 1.0kb upstream 1.0kb upstream 1000 false Scaffold2007: 174852-175851 Capsella grandiflora
Cagra.2007s0046 1.0kb downstream 1.0kb downstream 2886 true Scaffold2007: 175852-178737 Capsella grandiflora
Cagra.2007s0046 1.0kb downstream 1.0kb downstream 1000 false Scaffold2007: 177738-178737 Capsella grandiflora
Cagra.2007s0046 2.0kb upstream 2.0kb upstream 3886 true Scaffold2007: 173852-177737 Capsella grandiflora
Cagra.2007s0046 2.0kb upstream 2.0kb upstream 2000 false Scaffold2007: 173852-175851 Capsella grandiflora
Cagra.2007s0046 2.0kb downstream 2.0kb downstream 3886 true Scaffold2007: 175852-179737 Capsella grandiflora
Cagra.2007s0046 2.0kb downstream 2.0kb downstream 2000 false Scaffold2007: 177738-179737 Capsella grandiflora
Cagra.2007s0046 5.0kb upstream 5.0kb upstream 6886 true Scaffold2007: 170852-177737 Capsella grandiflora
Cagra.2007s0046 5.0kb upstream 5.0kb upstream 5000 false Scaffold2007: 170852-175851 Capsella grandiflora
Cagra.2007s0046 5.0kb downstream 5.0kb downstream 6886 true Scaffold2007: 175852-182737 Capsella grandiflora
Cagra.2007s0046 5.0kb downstream 5.0kb downstream 5000 false Scaffold2007: 177738-182737 Capsella grandiflora
Cagra.2007s0046 10.0kb upstream 10.0kb upstream 11886 true Scaffold2007: 165852-177737 Capsella grandiflora
Cagra.2007s0046 10.0kb upstream 10.0kb upstream 10000 false Scaffold2007: 165852-175851 Capsella grandiflora
Cagra.2007s0046 10.0kb downstream 10.0kb downstream 11886 true Scaffold2007: 175852-187737 Capsella grandiflora
Cagra.2007s0046 10.0kb downstream 10.0kb downstream 10000 false Scaffold2007: 177738-187737 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122337565 5261 Brassicaceae View MSA
123778210 5264 Brassicales-Malvales View MSA
124276560 5266 SBM View MSA
124131832 5268 Malvidae View MSA
123860183 5270 Rosid View MSA
123445812 5271 Pentapetalae View MSA
122481367 5272 Eudicot View MSA
122045669 5273 Angiosperm View MSA
121347130 5274 Embryophyte View MSA
123427064 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain