Gene : Cagra.2044s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR13511:SF0 - KXDL MOTIF-CONTAINING PROTEIN 1 Genomic Order:  1
Name:  ? Cagra.2044s0001 Secondary Identifier:  ? PAC:28901067
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2044s0001 0.5kb upstream 0.5kb upstream 1535 true Scaffold2044: 1-1535 Capsella grandiflora
Cagra.2044s0001 0.5kb upstream 0.5kb upstream 331 false Scaffold2044: 1-331 Capsella grandiflora
Cagra.2044s0001 0.5kb downstream 0.5kb downstream 1704 true Scaffold2044: 332-2035 Capsella grandiflora
Cagra.2044s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold2044: 1536-2035 Capsella grandiflora
Cagra.2044s0001 1.0kb upstream 1.0kb upstream 1535 true Scaffold2044: 1-1535 Capsella grandiflora
Cagra.2044s0001 1.0kb upstream 1.0kb upstream 331 false Scaffold2044: 1-331 Capsella grandiflora
Cagra.2044s0001 1.0kb downstream 1.0kb downstream 2204 true Scaffold2044: 332-2535 Capsella grandiflora
Cagra.2044s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold2044: 1536-2535 Capsella grandiflora
Cagra.2044s0001 2.0kb upstream 2.0kb upstream 1535 true Scaffold2044: 1-1535 Capsella grandiflora
Cagra.2044s0001 2.0kb upstream 2.0kb upstream 331 false Scaffold2044: 1-331 Capsella grandiflora
Cagra.2044s0001 2.0kb downstream 2.0kb downstream 3204 true Scaffold2044: 332-3535 Capsella grandiflora
Cagra.2044s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold2044: 1536-3535 Capsella grandiflora
Cagra.2044s0001 5.0kb upstream 5.0kb upstream 1535 true Scaffold2044: 1-1535 Capsella grandiflora
Cagra.2044s0001 5.0kb upstream 5.0kb upstream 331 false Scaffold2044: 1-331 Capsella grandiflora
Cagra.2044s0001 5.0kb downstream 5.0kb downstream 6204 true Scaffold2044: 332-6535 Capsella grandiflora
Cagra.2044s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold2044: 1536-6535 Capsella grandiflora
Cagra.2044s0001 10.0kb upstream 10.0kb upstream 1535 true Scaffold2044: 1-1535 Capsella grandiflora
Cagra.2044s0001 10.0kb upstream 10.0kb upstream 331 false Scaffold2044: 1-331 Capsella grandiflora
Cagra.2044s0001 10.0kb downstream 10.0kb downstream 11204 true Scaffold2044: 332-11535 Capsella grandiflora
Cagra.2044s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold2044: 1536-11535 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360399 5261 Brassicaceae View MSA
123836920 5264 Brassicales-Malvales View MSA
124345159 5266 SBM View MSA
124240361 5268 Malvidae View MSA
124066776 5270 Rosid View MSA
123745512 5271 Pentapetalae View MSA
122789930 5272 Eudicot View MSA
122042610 5273 Angiosperm View MSA
121346661 5274 Embryophyte View MSA
123380421 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain