Gene : Cagra.2093s0005 C. grandiflora v1.1
Defline:  (1 of 1) PTHR16140:SF0 - PROTEIN H21P03.2 Genomic Order:  5
Name:  ? Cagra.2093s0005 Secondary Identifier:  ? PAC:28899556
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2093s0005 0.5kb upstream 0.5kb upstream 2933 true Scaffold2093: 8736-11668 Capsella grandiflora
Cagra.2093s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold2093: 11169-11668 Capsella grandiflora
Cagra.2093s0005 0.5kb downstream 0.5kb downstream 2933 true Scaffold2093: 8236-11168 Capsella grandiflora
Cagra.2093s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold2093: 8236-8735 Capsella grandiflora
Cagra.2093s0005 1.0kb upstream 1.0kb upstream 3433 true Scaffold2093: 8736-12168 Capsella grandiflora
Cagra.2093s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold2093: 11169-12168 Capsella grandiflora
Cagra.2093s0005 1.0kb downstream 1.0kb downstream 3433 true Scaffold2093: 7736-11168 Capsella grandiflora
Cagra.2093s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold2093: 7736-8735 Capsella grandiflora
Cagra.2093s0005 2.0kb upstream 2.0kb upstream 4433 true Scaffold2093: 8736-13168 Capsella grandiflora
Cagra.2093s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold2093: 11169-13168 Capsella grandiflora
Cagra.2093s0005 2.0kb downstream 2.0kb downstream 4433 true Scaffold2093: 6736-11168 Capsella grandiflora
Cagra.2093s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold2093: 6736-8735 Capsella grandiflora
Cagra.2093s0005 5.0kb upstream 5.0kb upstream 7433 true Scaffold2093: 8736-16168 Capsella grandiflora
Cagra.2093s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold2093: 11169-16168 Capsella grandiflora
Cagra.2093s0005 5.0kb downstream 5.0kb downstream 7433 true Scaffold2093: 3736-11168 Capsella grandiflora
Cagra.2093s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold2093: 3736-8735 Capsella grandiflora
Cagra.2093s0005 10.0kb upstream 10.0kb upstream 12433 true Scaffold2093: 8736-21168 Capsella grandiflora
Cagra.2093s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold2093: 11169-21168 Capsella grandiflora
Cagra.2093s0005 10.0kb downstream 10.0kb downstream 11168 true Scaffold2093: 1-11168 Capsella grandiflora
Cagra.2093s0005 10.0kb downstream 10.0kb downstream 8735 false Scaffold2093: 1-8735 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376832 5261 Brassicaceae View MSA
123831627 5264 Brassicales-Malvales View MSA
124338228 5266 SBM View MSA
124237685 5268 Malvidae View MSA
124070075 5270 Rosid View MSA
123747962 5271 Pentapetalae View MSA
122793690 5272 Eudicot View MSA
122042819 5273 Angiosperm View MSA
121349826 5274 Embryophyte View MSA
123428670 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain