Gene : Cagra.1968s0148 C. grandiflora v1.1
Defline:  (1 of 1) PF02893//PF16016 - GRAM domain (GRAM) // Domain of unknown function (DUF4782) (DUF4782) Genomic Order:  148
Name:  ? Cagra.1968s0148 Secondary Identifier:  ? PAC:28910113
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1968s0148 0.5kb upstream 0.5kb upstream 4475 true Scaffold1968: 511926-516400 Capsella grandiflora
Cagra.1968s0148 0.5kb upstream 0.5kb upstream 500 false Scaffold1968: 511926-512425 Capsella grandiflora
Cagra.1968s0148 0.5kb downstream 0.5kb downstream 4475 true Scaffold1968: 512426-516900 Capsella grandiflora
Cagra.1968s0148 0.5kb downstream 0.5kb downstream 500 false Scaffold1968: 516401-516900 Capsella grandiflora
Cagra.1968s0148 1.0kb upstream 1.0kb upstream 4975 true Scaffold1968: 511426-516400 Capsella grandiflora
Cagra.1968s0148 1.0kb upstream 1.0kb upstream 1000 false Scaffold1968: 511426-512425 Capsella grandiflora
Cagra.1968s0148 1.0kb downstream 1.0kb downstream 4975 true Scaffold1968: 512426-517400 Capsella grandiflora
Cagra.1968s0148 1.0kb downstream 1.0kb downstream 1000 false Scaffold1968: 516401-517400 Capsella grandiflora
Cagra.1968s0148 2.0kb upstream 2.0kb upstream 5975 true Scaffold1968: 510426-516400 Capsella grandiflora
Cagra.1968s0148 2.0kb upstream 2.0kb upstream 2000 false Scaffold1968: 510426-512425 Capsella grandiflora
Cagra.1968s0148 2.0kb downstream 2.0kb downstream 5975 true Scaffold1968: 512426-518400 Capsella grandiflora
Cagra.1968s0148 2.0kb downstream 2.0kb downstream 2000 false Scaffold1968: 516401-518400 Capsella grandiflora
Cagra.1968s0148 5.0kb upstream 5.0kb upstream 8975 true Scaffold1968: 507426-516400 Capsella grandiflora
Cagra.1968s0148 5.0kb upstream 5.0kb upstream 5000 false Scaffold1968: 507426-512425 Capsella grandiflora
Cagra.1968s0148 5.0kb downstream 5.0kb downstream 8975 true Scaffold1968: 512426-521400 Capsella grandiflora
Cagra.1968s0148 5.0kb downstream 5.0kb downstream 5000 false Scaffold1968: 516401-521400 Capsella grandiflora
Cagra.1968s0148 10.0kb upstream 10.0kb upstream 13975 true Scaffold1968: 502426-516400 Capsella grandiflora
Cagra.1968s0148 10.0kb upstream 10.0kb upstream 10000 false Scaffold1968: 502426-512425 Capsella grandiflora
Cagra.1968s0148 10.0kb downstream 10.0kb downstream 13975 true Scaffold1968: 512426-526400 Capsella grandiflora
Cagra.1968s0148 10.0kb downstream 10.0kb downstream 10000 false Scaffold1968: 516401-526400 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364758 5261 Brassicaceae View MSA
123827449 5264 Brassicales-Malvales View MSA
124341741 5266 SBM View MSA
124240628 5268 Malvidae View MSA
124067059 5270 Rosid View MSA
123738986 5271 Pentapetalae View MSA
122786570 5272 Eudicot View MSA
122041876 5273 Angiosperm View MSA
121343917 5274 Embryophyte View MSA
123428454 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain