Gene : Cagra.1968s0155 C. grandiflora v1.1
Defline:  (1 of 43) PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  155
Name:  ? Cagra.1968s0155 Secondary Identifier:  ? PAC:28910015
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1968s0155 0.5kb upstream 0.5kb upstream 2400 true Scaffold1968: 532825-535224 Capsella grandiflora
Cagra.1968s0155 0.5kb upstream 0.5kb upstream 500 false Scaffold1968: 534725-535224 Capsella grandiflora
Cagra.1968s0155 0.5kb downstream 0.5kb downstream 2400 true Scaffold1968: 532325-534724 Capsella grandiflora
Cagra.1968s0155 0.5kb downstream 0.5kb downstream 500 false Scaffold1968: 532325-532824 Capsella grandiflora
Cagra.1968s0155 1.0kb upstream 1.0kb upstream 2900 true Scaffold1968: 532825-535724 Capsella grandiflora
Cagra.1968s0155 1.0kb upstream 1.0kb upstream 1000 false Scaffold1968: 534725-535724 Capsella grandiflora
Cagra.1968s0155 1.0kb downstream 1.0kb downstream 2900 true Scaffold1968: 531825-534724 Capsella grandiflora
Cagra.1968s0155 1.0kb downstream 1.0kb downstream 1000 false Scaffold1968: 531825-532824 Capsella grandiflora
Cagra.1968s0155 2.0kb upstream 2.0kb upstream 3900 true Scaffold1968: 532825-536724 Capsella grandiflora
Cagra.1968s0155 2.0kb upstream 2.0kb upstream 2000 false Scaffold1968: 534725-536724 Capsella grandiflora
Cagra.1968s0155 2.0kb downstream 2.0kb downstream 3900 true Scaffold1968: 530825-534724 Capsella grandiflora
Cagra.1968s0155 2.0kb downstream 2.0kb downstream 2000 false Scaffold1968: 530825-532824 Capsella grandiflora
Cagra.1968s0155 5.0kb upstream 5.0kb upstream 6900 true Scaffold1968: 532825-539724 Capsella grandiflora
Cagra.1968s0155 5.0kb upstream 5.0kb upstream 5000 false Scaffold1968: 534725-539724 Capsella grandiflora
Cagra.1968s0155 5.0kb downstream 5.0kb downstream 6900 true Scaffold1968: 527825-534724 Capsella grandiflora
Cagra.1968s0155 5.0kb downstream 5.0kb downstream 5000 false Scaffold1968: 527825-532824 Capsella grandiflora
Cagra.1968s0155 10.0kb upstream 10.0kb upstream 8477 true Scaffold1968: 532825-541301 Capsella grandiflora
Cagra.1968s0155 10.0kb upstream 10.0kb upstream 6577 false Scaffold1968: 534725-541301 Capsella grandiflora
Cagra.1968s0155 10.0kb downstream 10.0kb downstream 11900 true Scaffold1968: 522825-534724 Capsella grandiflora
Cagra.1968s0155 10.0kb downstream 10.0kb downstream 10000 false Scaffold1968: 522825-532824 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374410 5261 Brassicaceae View MSA
123832410 5264 Brassicales-Malvales View MSA
124343408 5266 SBM View MSA
124244943 5268 Malvidae View MSA
124062625 5270 Rosid View MSA
123739540 5271 Pentapetalae View MSA
122790225 5272 Eudicot View MSA
122049132 5273 Angiosperm View MSA
121351065 5274 Embryophyte View MSA
123381996 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain