Gene : Cagra.1968s0157 C. grandiflora v1.1
Defline:  (1 of 1) KOG3392 - Exon-exon junction complex, Magoh component Genomic Order:  157
Name:  ? Cagra.1968s0157 Secondary Identifier:  ? PAC:28910011
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1968s0157 0.5kb upstream 0.5kb upstream 1960 true Scaffold1968: 538634-540593 Capsella grandiflora
Cagra.1968s0157 0.5kb upstream 0.5kb upstream 500 false Scaffold1968: 538634-539133 Capsella grandiflora
Cagra.1968s0157 0.5kb downstream 0.5kb downstream 1960 true Scaffold1968: 539134-541093 Capsella grandiflora
Cagra.1968s0157 0.5kb downstream 0.5kb downstream 500 false Scaffold1968: 540594-541093 Capsella grandiflora
Cagra.1968s0157 1.0kb upstream 1.0kb upstream 2460 true Scaffold1968: 538134-540593 Capsella grandiflora
Cagra.1968s0157 1.0kb upstream 1.0kb upstream 1000 false Scaffold1968: 538134-539133 Capsella grandiflora
Cagra.1968s0157 1.0kb downstream 1.0kb downstream 2168 true Scaffold1968: 539134-541301 Capsella grandiflora
Cagra.1968s0157 1.0kb downstream 1.0kb downstream 708 false Scaffold1968: 540594-541301 Capsella grandiflora
Cagra.1968s0157 2.0kb upstream 2.0kb upstream 3460 true Scaffold1968: 537134-540593 Capsella grandiflora
Cagra.1968s0157 2.0kb upstream 2.0kb upstream 2000 false Scaffold1968: 537134-539133 Capsella grandiflora
Cagra.1968s0157 2.0kb downstream 2.0kb downstream 2168 true Scaffold1968: 539134-541301 Capsella grandiflora
Cagra.1968s0157 2.0kb downstream 2.0kb downstream 708 false Scaffold1968: 540594-541301 Capsella grandiflora
Cagra.1968s0157 5.0kb upstream 5.0kb upstream 6460 true Scaffold1968: 534134-540593 Capsella grandiflora
Cagra.1968s0157 5.0kb upstream 5.0kb upstream 5000 false Scaffold1968: 534134-539133 Capsella grandiflora
Cagra.1968s0157 5.0kb downstream 5.0kb downstream 2168 true Scaffold1968: 539134-541301 Capsella grandiflora
Cagra.1968s0157 5.0kb downstream 5.0kb downstream 708 false Scaffold1968: 540594-541301 Capsella grandiflora
Cagra.1968s0157 10.0kb upstream 10.0kb upstream 11460 true Scaffold1968: 529134-540593 Capsella grandiflora
Cagra.1968s0157 10.0kb upstream 10.0kb upstream 10000 false Scaffold1968: 529134-539133 Capsella grandiflora
Cagra.1968s0157 10.0kb downstream 10.0kb downstream 2168 true Scaffold1968: 539134-541301 Capsella grandiflora
Cagra.1968s0157 10.0kb downstream 10.0kb downstream 708 false Scaffold1968: 540594-541301 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362533 5261 Brassicaceae View MSA
123835313 5264 Brassicales-Malvales View MSA
124345053 5266 SBM View MSA
124248119 5268 Malvidae View MSA
124066056 5270 Rosid View MSA
123753775 5271 Pentapetalae View MSA
122786984 5272 Eudicot View MSA
122044981 5273 Angiosperm View MSA
121347461 5274 Embryophyte View MSA
123426224 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain