Gene : Cagra.1981s0010 C. grandiflora v1.1
Defline:  (1 of 38) PF00564 - PB1 domain (PB1) Genomic Order:  10
Name:  ? Cagra.1981s0010 Secondary Identifier:  ? PAC:28895156
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1981s0010 0.5kb upstream 0.5kb upstream 2739 true Scaffold1981: 41863-44601 Capsella grandiflora
Cagra.1981s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold1981: 41863-42362 Capsella grandiflora
Cagra.1981s0010 0.5kb downstream 0.5kb downstream 2739 true Scaffold1981: 42363-45101 Capsella grandiflora
Cagra.1981s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold1981: 44602-45101 Capsella grandiflora
Cagra.1981s0010 1.0kb upstream 1.0kb upstream 3239 true Scaffold1981: 41363-44601 Capsella grandiflora
Cagra.1981s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold1981: 41363-42362 Capsella grandiflora
Cagra.1981s0010 1.0kb downstream 1.0kb downstream 3239 true Scaffold1981: 42363-45601 Capsella grandiflora
Cagra.1981s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold1981: 44602-45601 Capsella grandiflora
Cagra.1981s0010 2.0kb upstream 2.0kb upstream 4239 true Scaffold1981: 40363-44601 Capsella grandiflora
Cagra.1981s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold1981: 40363-42362 Capsella grandiflora
Cagra.1981s0010 2.0kb downstream 2.0kb downstream 4239 true Scaffold1981: 42363-46601 Capsella grandiflora
Cagra.1981s0010 2.0kb downstream 2.0kb downstream 2000 false Scaffold1981: 44602-46601 Capsella grandiflora
Cagra.1981s0010 5.0kb upstream 5.0kb upstream 7239 true Scaffold1981: 37363-44601 Capsella grandiflora
Cagra.1981s0010 5.0kb upstream 5.0kb upstream 5000 false Scaffold1981: 37363-42362 Capsella grandiflora
Cagra.1981s0010 5.0kb downstream 5.0kb downstream 7239 true Scaffold1981: 42363-49601 Capsella grandiflora
Cagra.1981s0010 5.0kb downstream 5.0kb downstream 5000 false Scaffold1981: 44602-49601 Capsella grandiflora
Cagra.1981s0010 10.0kb upstream 10.0kb upstream 12239 true Scaffold1981: 32363-44601 Capsella grandiflora
Cagra.1981s0010 10.0kb upstream 10.0kb upstream 10000 false Scaffold1981: 32363-42362 Capsella grandiflora
Cagra.1981s0010 10.0kb downstream 10.0kb downstream 12239 true Scaffold1981: 42363-54601 Capsella grandiflora
Cagra.1981s0010 10.0kb downstream 10.0kb downstream 10000 false Scaffold1981: 44602-54601 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364560 5261 Brassicaceae View MSA
123840833 5264 Brassicales-Malvales View MSA
124345749 5266 SBM View MSA
124253150 5268 Malvidae View MSA
124050389 5270 Rosid View MSA
123750772 5271 Pentapetalae View MSA
122787571 5272 Eudicot View MSA
122050894 5273 Angiosperm View MSA
121312193 5274 Embryophyte View MSA
123349392 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain