Gene : Cagra.1986s0004 C. grandiflora v1.1
Defline:  (1 of 1) PTHR23257:SF434 - PAS DOMAIN-CONTAINING PROTEIN TYROSINE KINASE FAMILY PROTEIN Genomic Order:  4
Name:  ? Cagra.1986s0004 Secondary Identifier:  ? PAC:28893560
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1986s0004 0.5kb upstream 0.5kb upstream 4423 true Scaffold1986: 13743-18165 Capsella grandiflora
Cagra.1986s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold1986: 13743-14242 Capsella grandiflora
Cagra.1986s0004 0.5kb downstream 0.5kb downstream 4423 true Scaffold1986: 14243-18665 Capsella grandiflora
Cagra.1986s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold1986: 18166-18665 Capsella grandiflora
Cagra.1986s0004 1.0kb upstream 1.0kb upstream 4923 true Scaffold1986: 13243-18165 Capsella grandiflora
Cagra.1986s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold1986: 13243-14242 Capsella grandiflora
Cagra.1986s0004 1.0kb downstream 1.0kb downstream 4923 true Scaffold1986: 14243-19165 Capsella grandiflora
Cagra.1986s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold1986: 18166-19165 Capsella grandiflora
Cagra.1986s0004 2.0kb upstream 2.0kb upstream 5923 true Scaffold1986: 12243-18165 Capsella grandiflora
Cagra.1986s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold1986: 12243-14242 Capsella grandiflora
Cagra.1986s0004 2.0kb downstream 2.0kb downstream 5923 true Scaffold1986: 14243-20165 Capsella grandiflora
Cagra.1986s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold1986: 18166-20165 Capsella grandiflora
Cagra.1986s0004 5.0kb upstream 5.0kb upstream 8923 true Scaffold1986: 9243-18165 Capsella grandiflora
Cagra.1986s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold1986: 9243-14242 Capsella grandiflora
Cagra.1986s0004 5.0kb downstream 5.0kb downstream 8923 true Scaffold1986: 14243-23165 Capsella grandiflora
Cagra.1986s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold1986: 18166-23165 Capsella grandiflora
Cagra.1986s0004 10.0kb upstream 10.0kb upstream 13923 true Scaffold1986: 4243-18165 Capsella grandiflora
Cagra.1986s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold1986: 4243-14242 Capsella grandiflora
Cagra.1986s0004 10.0kb downstream 10.0kb downstream 13923 true Scaffold1986: 14243-28165 Capsella grandiflora
Cagra.1986s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold1986: 18166-28165 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362068 5261 Brassicaceae View MSA
123833874 5264 Brassicales-Malvales View MSA
124342782 5266 SBM View MSA
124239480 5268 Malvidae View MSA
124062352 5270 Rosid View MSA
123741165 5271 Pentapetalae View MSA
122787795 5272 Eudicot View MSA
122045217 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121310418 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain